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Published on: November 29, 2016
Differential sensitivity of transcription factors to mustard-damaged DNA
X M Chen1, P J Gray, C Cullinane
1Department of Biochemistry, La Trobe University, Bundoora, Victoria, Australia.
Abstract:
Nitrogen mustard (bis(2-chloroethyl) methylamine, HN2) inhibited the binding of upstream factors Sp1 and AP2 to their consensus sequences. At concentrations where 50% of the consensus sequence DNA contained at least one lesion, HN2 inhibited formation of the Sp1 complex by 37% (40 microM HN2) and the AP2 complex by 40% (50 microM HN2). The binding of the TATA binding protein (TBP) to the TATA element was also inhibited by HN2, whereas sulphur mustard and the monofunctional sulphur mustard 2-chloroethyl ethyl sulphide (CEES) resulted in a disproportional extent of inhibition with respect to the level of alkylation. The level of alkylation of the TBP oligonucleotide varied significantly at 100 microM drug, with 80, 42 and 15% of HN2, sulphur mustard and CEES, respectively. However, this level of alkylation inhibited formation of the TBP-DNA complex by 70, 70 and 45%, respectively. This differential sensitivity of transcription factors to mustard-induced DNA damage therefore appears to reside dominantly in the stereochemical differences between the specific mustard lesions.
Insights
Nitrogen mustard (HN2) and other alkylating agents damage DNA, inhibiting transcription factor binding. Differences in DNA lesion stereochemistry explain varying sensitivities of factors like Sp1, AP2, and TBP to this damage.
Area of Science:
- Molecular Biology
- Toxicology
- Biochemistry
Background:
- Nitrogen mustards are alkylating agents that can damage DNA.
- Transcription factors bind to specific DNA sequences to regulate gene expression.
- DNA damage can interfere with transcription factor binding and gene regulation.
Purpose of the Study:
- To investigate the effects of nitrogen mustard (HN2) and related compounds on the binding of transcription factors to DNA.
- To determine if DNA damage caused by different mustards differentially affects transcription factor binding.
- To explore the role of DNA lesion stereochemistry in the sensitivity of transcription factors to alkylating agents.
Main Methods:
- Inhibition of Sp1 and AP2 binding to consensus sequences by HN2.
- Assessment of TATA binding protein (TBP) binding to the TATA element.
- Quantification of DNA alkylation levels by HN2, sulfur mustard, and 2-chloroethyl ethyl sulfide (CEES).
- Correlation of DNA alkylation with inhibition of TBP-DNA complex formation.
Main Results:
- HN2 inhibited Sp1 and AP2 complex formation at specific concentrations.
- HN2, sulfur mustard, and CEES showed varying levels of DNA alkylation on TBP oligonucleotides.
- Despite similar alkylation levels for HN2 and sulfur mustard, both significantly inhibited TBP-DNA complex formation compared to CEES.
- Differential sensitivity of transcription factors to mustard-induced DNA damage was observed.
Conclusions:
- The binding of transcription factors Sp1, AP2, and TBP is inhibited by nitrogen mustard (HN2).
- The extent of inhibition is not always proportional to the level of DNA alkylation, suggesting other factors are involved.
- Stereochemical differences in DNA lesions induced by various mustards play a dominant role in the differential sensitivity of transcription factors.
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