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Related Experiment Videos

Rice as a model for cereal genomics.

S A Goff1

  • 1Novartis Agricultural Discovery Institute, 3050 Science Park Road, San Diego, CA 92121, USA. goffs@scripps.edu

Current Opinion in Plant Biology
|May 14, 1999
PubMed
Summary
This summary is machine-generated.

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Rice genome sequencing reveals collinearity with other cereals. Public databases now contain numerous gene sequences and markers, making rice a prime candidate for whole genome sequencing.

Area of Science:

  • Genomics
  • Molecular Biology
  • Plant Science

Background:

  • Selected regions of the rice genome have been sequenced over the past two years.
  • Sequence-level collinearity has been observed between rice and limited regions of other cereal genomes.
  • Public databases have accumulated a substantial number of expressed gene sequences and molecular markers.

Purpose of the Study:

  • To highlight the progress in rice genome sequencing.
  • To underscore the significance of sequence collinearity with other cereals.
  • To identify rice as an attractive candidate for whole genome sequencing.

Main Methods:

  • Sequencing of selected rice genome regions.
  • Comparative analysis of rice genome sequences with other cereal genomes.

Related Experiment Videos

  • Database mining for expressed gene sequences and molecular markers.
  • Construction of large insert clone libraries for the rice genome.

    • Main Results:

    • Demonstrated sequence-level collinearity between rice and specific regions of other cereal genomes.
    • Accumulation of a large volume of expressed gene sequences and molecular markers in public databases.
    • Successful construction of large insert clone libraries for the rice genome.

    Conclusions:

    • The rice genome exhibits significant collinearity with other cereal genomes.
    • Extensive genomic data and resources are publicly available for rice.
    • Rice is a highly suitable and attractive model organism for whole genome sequencing projects.