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Updated: Aug 13, 2026

Analysis of mRNA Nuclear Export Kinetics in Mammalian Cells by Microinjection
Published on: December 4, 2010
A Crm1p-independent nuclear export path for the mRNA-associated protein, Npl3p/Mtr13p
1Pathology Department and Cell Biology Program, Case Western Reserve University School of Medicine, Cleveland, OH 44106, USA.
Abstract:
mRNA export involves association of mRNAs with nucleoplasmic proteins, delivery to the nuclear pore complex, translocation to the cytoplasm, and reimport of recycling components. Many yeast mutants inhibit mRNA export, but there is little information concerning the RNA carriers and steps of transport that they affect. The hnRNP/serine-arginine-rich-like protein, Npl3p/Mtr13p, binds poly(A)+ RNA and shuttles between the nucleus and cytoplasm. Its export accelerates on inhibition of RNA synthesis. In vivo tests show that its export requires two proteins with putative leucine-rich nuclear export signals: Gle1p, Mex67p, and several additional nuclear and nuclear pore complex-associated proteins. Surprisingly, a nonnuclear pool of an import factor (the importin alpha homologue, Srp1p) is also required. Changes in the methylation status of Npl3p do not correlate with its nucleocytoplasmic distribution. A crm1 mutant that inhibits export of proteins with leucine-rich nuclear export signals and mRNAs does not inhibit Npl3p export. Moreover, several proteins needed for Npl3p export are not needed for export of a typical Crm1p cargo. Thus, Npl3p export requires only a subset of proteins implicated in mRNA export, suggesting that more than one mRNA export path exists. A distinct group of mutants, including a mutation of a member of the importin beta superfamily, inhibits Npl3p reimport from the cytoplasm.
Insights
The study reveals that the protein Npl3p/Mtr13p utilizes a distinct pathway for mRNA export, separate from the Crm1p pathway, involving specific nuclear export and import factors.
Area of Science:
- Molecular Biology
- Cell Biology
- Genetics
Background:
- mRNA export is crucial for gene expression, involving protein association, nuclear pore complex translocation, and cytoplasmic reimport.
- Understanding the specific RNA carriers and transport steps affected by yeast mutants is limited.
- Npl3p/Mtr13p is a nucleocytoplasmic shuttling protein that binds poly(A)+ RNA.
Purpose of the Study:
- To investigate the specific proteins and pathways involved in the mRNA export mediated by Npl3p/Mtr13p.
- To determine if Npl3p/Mtr13p export utilizes the Crm1p-dependent pathway or a distinct mechanism.
- To identify factors required for both Npl3p export and reimport.
Main Methods:
- Utilized yeast genetics and in vivo assays to study Npl3p/Mtr13p nucleocytoplasmic transport.
- Investigated the role of proteins with leucine-rich nuclear export signals (e.g., Gle1p, Mex67p) in Npl3p export.
- Examined the requirement of import factors, such as Srp1p, for Npl3p export.
- Analyzed the effect of specific mutants (e.g., crm1, importin beta superfamily members) on Npl3p transport.
Main Results:
- Npl3p/Mtr13p export is independent of the Crm1p pathway, which typically exports proteins with leucine-rich nuclear export signals and mRNAs.
- Npl3p/Mtr13p export requires Gle1p, Mex67p, and a non-nuclear pool of the importin alpha homologue, Srp1p.
- Changes in Npl3p methylation status do not correlate with its nucleocytoplasmic distribution.
- Specific importin beta superfamily mutants inhibit Npl3p reimport from the cytoplasm.
Conclusions:
- Npl3p/Mtr13p export utilizes a subset of proteins involved in mRNA export, suggesting the existence of multiple mRNA export pathways.
- Npl3p/Mtr13p export and reimport involve distinct sets of proteins and pathways.
- The findings provide new insights into the complexity of mRNA export and nucleocytoplasmic transport mechanisms in yeast.
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