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Updated: Aug 17, 2026

Reporter-based Growth Assay for Systematic Analysis of Protein Degradation
Published on: November 6, 2014
Regulated degradation of yeast ornithine decarboxylase
1Department of Microbiology and Immunology, University of California, San Francisco, San Francisco, California 94143-0414, USA.
Abstract:
Ornithine decarboxylase (ODC) declines in cells that accumulate an excess of polyamines, the downstream products of the enzyme. Superfluous production of polyamines is thus prevented. In animal cells, polyamines reduce ODC activity by accelerating its degradation. Similar down-regulation of ODC activity has been observed in the budding yeast Saccharomyces cerevisiae, but induced degradation has not been documented. Here we show using pulse-chase analysis that the loss of enzyme activity is the result of increased degradation of ODC. Polyamines reduce the half-life of the newly synthesized protein from 3 h to approximately 10 min. Degradation of bulk ODC pools is also accelerated by polyamines, but the absolute rate of turnover is slower, with a half-life of 5 h in untreated and 1 h in treated cells. Newly synthesized ODC polypeptide thus undergoes a process of maturation that renders it relatively resistant to both basal and polyamine-induced degradation. Proteasome mutants have a blunted or absent regulatory response, implicating both the core protease and the regulatory cap of the proteasome in induced degradation of yeast ODC.
Insights
Polyamines accelerate the degradation of ornithine decarboxylase (ODC) in yeast, reducing its half-life. This degradation process involves the proteasome, crucial for regulating polyamine levels.
Area of Science:
- Biochemistry
- Molecular Biology
- Cell Biology
Background:
- Ornithine decarboxylase (ODC) activity is regulated by polyamines, its downstream products, to prevent excess production.
- While polyamine-induced ODC degradation is known in animal cells, it remained unconfirmed in yeast (Saccharomyces cerevisiae).
Purpose of the Study:
- To investigate the mechanism of ornithine decarboxylase (ODC) down-regulation in Saccharomyces cerevisiae.
- To determine if polyamines induce ODC degradation in yeast and identify the cellular machinery involved.
Main Methods:
- Pulse-chase analysis was employed to track the degradation rate of newly synthesized ODC.
- Experiments utilized proteasome mutants to assess the role of the proteasome in ODC regulation.
Main Results:
- Polyamines significantly decrease the half-life of newly synthesized ODC from 3 hours to approximately 10 minutes.
- Both newly synthesized and bulk ODC pools exhibit accelerated degradation in the presence of polyamines.
- Proteasome mutants displayed impaired or absent regulatory responses, indicating the proteasome's essential role.
Conclusions:
- Induced degradation is the primary mechanism for ODC activity reduction in yeast, mediated by polyamines.
- The proteasome, including its core and regulatory cap, is critical for polyamine-induced ODC degradation in yeast.
- A maturation process confers partial resistance to degradation on newly synthesized ODC.
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