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Updated: Mar 2, 2026

De novo Identification of Actively Translated Open Reading Frames with Ribosome Profiling Data
Published on: February 18, 2022
Translation driven by an eIF4G core domain in vivo
E De Gregorio1, T Preiss, M W Hentze
1Gene Expression Programme, European Molecular Biology Laboratory, Meyerhofstrasse 1, D-69117 Heidelberg, Germany.
Scientists identified a key region in eukaryotic translation initiation factor 4G (eIF4G) that can independently drive mRNA translation. This "ribosome recruitment core" is sufficient for protein synthesis in cells, even when cap-dependent translation is blocked.
Area of Science:
- Molecular Biology
- Biochemistry
- Genetics
Background:
- Eukaryotic mRNA translation initiation relies on 5' cap and 3' poly(A) tail interactions with translation factors.
- eukaryotic translation initiation factor 4G (eIF4G) acts as a scaffold, bridging eIF4E and poly(A) binding protein (PABP) to recruit ribosomes.
Purpose of the Study:
- To investigate the minimal functional domain of eIF4G required for ribosome recruitment and translation initiation.
- To determine if this domain can drive translation independently of canonical cap-dependent pathways.
Main Methods:
- Construction of a chimeric protein by fusing the C-terminal region of eIF4GI to the Iron Regulatory Protein 1 (IRP-1).
- Utilized bicistronic mRNAs with Internal Ribosome Entry Sites (IRES) to assess translation in vivo.
- Performed deletion analysis on eIF4G to map functional domains.
Main Results:
- The chimeric protein successfully directed translation of downstream cistrons in bicistronic mRNAs.
- Translation was achieved even when 5' cap-dependent initiation was inhibited.
- A conserved central domain (amino acids 642-1091) of eIF4G was identified as an autonomous ribosome recruitment core, dependent on eIF4A binding.
Conclusions:
- The conserved central domain of eIF4G is sufficient to drive mRNA translation in living cells.
- This 'ribosome recruitment core' can mediate cap-independent translation.
- The C-terminal region of eIF4G is not essential for this function and may play a regulatory role.
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