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Gene structure of CYP2C8 and extrahepatic distribution of the human CYP2Cs
T S Klose1, J A Blaisdell, J A Goldstein
1Laboratory of Pharmacology and Chemistry, National Institute of Environmental Health Sciences, Research Triangle Park, North Carolina 27709, USA.
Abstract:
Extrahepatic tissue distribution of the mRNAs for the four human CYP2Cs (2C8, 2C9, 2C18, and 2C19) was examined in kidney, testes, adrenal gland, prostate, brain, uterus, mammary gland, ovary, lung, and duodenum. CYP2C mRNAs were detected by RT-PCR using specific primers for each individual CYP2C. CYP2C8 mRNA was detected in the kidney, adrenal gland, brain, uterus, mammary gland, ovary, and duodenum. CYP2C9 mRNA was detected in the kidney, testes, adrenal gland, prostate, ovary, and duodenum. CYP2C18 mRNA was found only in the brain, uterus, mammary gland, kidney, and duodenum and CYP2C19 mRNA was found only in the duodenum. Immunoblot analysis of small intestinal microsomes detected both 2C9 and 2C19 proteins. In addition, genomic clones for CYP2C8 were sequenced, and long-distance PCR was performed to determine the complete gene structure. CYP2C8 spanned a 31 kb region. Comparative analysis of the 2.4 kb upstream region of CYP2C8 with CYP2C9 revealed two previously unidentified transcription factors sites, C/EBP and HPF-1, and the latter might be involved in hepatic expression. Although CYP2C8 has been shown to be phenobarbital inducible, neither a barbiturate-responsive regulatory sequence (a Barbie box) nor a phenobarbital-responsive enhancer module (PBREM) was found within the upstream region analyzed.
Insights
This study maps the tissue distribution of human CYP2C mRNAs, finding varied expression patterns across organs. It also details the gene structure of CYP2C8 and identifies novel regulatory elements.
Area of Science:
- Pharmacogenomics
- Molecular Biology
- Biochemistry
Background:
- The cytochrome P450 family, specifically CYP2Cs, plays a crucial role in drug metabolism.
- Understanding the extrahepatic tissue distribution of CYP2C isoforms is essential for predicting drug interactions and toxicity beyond the liver.
Purpose of the Study:
- To comprehensively map the extrahepatic mRNA distribution of human CYP2C8, CYP2C9, CYP2C18, and CYP2C19.
- To elucidate the gene structure of CYP2C8 and identify potential regulatory elements influencing its expression.
Main Methods:
- Reverse transcription-polymerase chain reaction (RT-PCR) was employed to detect CYP2C mRNA in various human tissues.
- Immunoblot analysis was used to confirm protein expression of CYP2C9 and CYP2C19.
- Long-distance PCR and genomic sequencing were utilized to determine the gene structure of CYP2C8.
Main Results:
- CYP2C8 mRNA was detected in kidney, adrenal gland, brain, uterus, mammary gland, ovary, and duodenum.
- CYP2C9 mRNA was found in kidney, testes, adrenal gland, prostate, ovary, and duodenum.
- CYP2C18 and CYP2C19 mRNAs exhibited more restricted tissue distribution, with CYP2C19 exclusively detected in the duodenum. Both CYP2C9 and CYP2C19 proteins were identified in small intestinal microsomes. The CYP2C8 gene spans 31 kb, and its upstream region contains novel transcription factor sites (C/EBP and HPF-1).
Conclusions:
- The distinct extrahepatic tissue distribution of CYP2C isoforms suggests specialized roles in various organs.
- The identification of novel regulatory elements in the CYP2C8 upstream region provides insights into its transcriptional control.
- Further research is warranted to explore the functional implications of these findings in drug metabolism and disease.
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