Related Experiment Video
Updated: Oct 19, 2026

Characterization at the Molecular Level using Robust Biochemical Approaches of a New Kinase Protein
Published on: June 30, 2019
Characterization of S6K2, a novel kinase homologous to S6K1
K K Lee-Fruman1, C J Kuo, J Lippincott
1Department of Cell Biology, Harvard Medical School, Boston, Massachusetts, MA 02115, USA.
Abstract:
Rapamycin is an immunosuppressant which antagonizes cellular proliferation by inhibiting the function of mTOR. The mTOR:FKBP12: rapamycin complex blocks G1/S transition by inhibiting downstream targets essential for cell cycle progression. One such target is p70S6k1 (S6K1), a serine/threonine kinase which is inactivated by the mTOR : FKBP12 : rapamycin complex, and which has been linked to translational control by virtue of its ability to phosphorylate the ribosomal protein S6. In the current work, we describe cloning and characterization of a novel S6K1 homolog, p54 S6 kinase 2 (p54S6k2/S6K2). Similar to S6K1, S6K2 is activated by mitogens and by constitutively active PI3K, and is inhibited by rapamycin as well as wortmannin. Differences between activation of S6K1 and S6K2 by PDK1 were observed, suggesting potential differences in the regulation of these homologs. Strikingly, S6K2 activity and S6 phosphorylation were both intact in S6K1-/-ES cell, indicating a possible role for S6K2 in in vivo S6 phosphorylation. Interestingly, we found two isoforms of S6K2 which are localized to distinct cellular compartments; the smaller form resides in the detergent-soluble fraction, whereas the larger form is found in the particulate fraction. Our findings demonstrate the existence of a family of rapamycin-sensitive protein kinases potentially involved in S6 phosphorylation, translational control, and transduction of mTOR signals.
Insights
Researchers identified a new protein kinase, S6K2, which is inhibited by rapamycin and may play a role in cellular proliferation and translational control, similar to S6K1.
Area of Science:
- Molecular Biology
- Cell Biology
- Biochemistry
Background:
- Rapamycin is an immunosuppressant that inhibits mTOR, a key regulator of cellular proliferation.
- The mTOR:FKBP12:rapamycin complex inhibits cell cycle progression by targeting downstream proteins like p70S6k1 (S6K1).
- S6K1 phosphorylates ribosomal protein S6, influencing translational control.
Purpose of the Study:
- To clone and characterize a novel homolog of S6K1, named p54 S6 kinase 2 (p54S6k2/S6K2).
- To investigate the regulation and function of S6K2 in relation to S6K1 and mTOR signaling.
- To explore the potential role of S6K2 in S6 phosphorylation and translational control.
Main Methods:
- Cloning and characterization of the S6K2 gene and protein.
- Assessing S6K2 activation by mitogens, PI3K, and PDK1.
- Evaluating the effect of rapamycin and wortmannin on S6K2 activity.
- Analyzing S6K2 activity and S6 phosphorylation in S6K1 knockout (S6K1-/-) ES cells.
- Determining the cellular localization of different S6K2 isoforms.
Main Results:
- A novel S6K1 homolog, S6K2, was cloned and characterized.
- S6K2 activation is stimulated by mitogens and PI3K, and inhibited by rapamycin and wortmannin.
- Differences in PDK1 activation suggest distinct regulatory mechanisms for S6K1 and S6K2.
- S6K2 activity and S6 phosphorylation were observed in S6K1-/- ES cells, indicating S6K2's role in in vivo S6 phosphorylation.
- Two S6K2 isoforms with distinct subcellular localizations (soluble and particulate) were identified.
Conclusions:
- The study demonstrates the existence of a family of rapamycin-sensitive protein kinases, including S6K1 and S6K2.
- S6K2 is a functional homolog of S6K1 and may contribute to S6 phosphorylation and translational control.
- Distinct isoforms and regulatory differences suggest complex roles for S6K2 in mTOR signaling pathways.
Related Concept Videos
Protein Kinases and Phosphatases
Protein kinases
Many proteins in the cell are regulated by phosphorylation, the addition of a phosphate group. A family of enzymes called kinases...
Protein Kinases and Phosphatases
Protein kinases
Many proteins in the cell are regulated by phosphorylation, the addition of a phosphate group. A family of enzymes called kinases...
Positive Regulator Molecules
Protein Complexes with Interchangeable Parts
The SCF ubiquitin ligase is a protein complex of five individual proteins. This complex attaches ubiquitin to other target proteins to mark them for degradation. In order to...
Inhibition of Cdk Activity
S-Cdk Initiates DNA Replication
Two states at the origin of replication
In eukaryotes, the initiation of replication occurs at many sites on the chromosomes, called the origins of replication.

