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Updated: Aug 18, 2026

Experimental Human Pneumococcal Carriage
Published on: February 15, 2013
Increased carriage of resistant non-pneumococcal alpha-hemolytic streptococci after antibiotic therapy
F Ghaffar1, I R Friedland, K Katz
1Department of Pediatrics, Division of Infectious Disease, University of Texas Southwestern Medical Center, Dallas, Texas 75235-9063, USA.
Insights
Antibiotic treatment for ear infections increased colonization by non-pneumococcal alpha-hemolytic streptococci (AHS) in children, while decreasing pneumococcal carriage. Many AHS strains were multidrug-resistant.
Area of Science:
- Microbiology
- Pediatrics
- Infectious Diseases
Background:
- Acute otitis media (AOM) is a common childhood infection often treated with antibiotics.
- The nasopharyngeal microbiome plays a crucial role in respiratory health and susceptibility to infections.
- Understanding the impact of antibiotic therapy on bacterial colonization is essential for managing AOM and antibiotic resistance.
Purpose of the Study:
- To compare the colonization and antibiotic resistance rates of non-pneumococcal alpha-hemolytic streptococci (AHS) and Streptococcus pneumoniae in children undergoing antibiotic treatment for AOM.
- To investigate the effect of amoxicillin/clavulanate versus azithromycin on the nasopharyngeal carriage of these streptococcal species.
Main Methods:
- A randomized controlled trial involving children aged 6 months to 6 years diagnosed with AOM.
- Participants received either amoxicillin/clavulanate or azithromycin for 10 days.
- Nasopharyngeal swabs were collected before, and at 2 weeks and 2 months after antibiotic therapy for bacterial identification and susceptibility testing.
Main Results:
- Antibiotic therapy significantly increased the nasopharyngeal carriage rate of non-pneumococcal AHS from 14% to 32% at 2 weeks (P =.02).
- In contrast, the carriage of Streptococcus pneumoniae decreased from 51% to 27% at 2 weeks (P =.002).
- The prevalence of penicillin-resistant AHS strains rose from 9% to 36% by 2 months post-treatment.
Conclusions:
- Amoxicillin/clavulanate and azithromycin treatments disrupt the nasopharyngeal microbial balance, favoring the growth of non-pneumococcal AHS over S. pneumoniae.
- A significant proportion of the increased AHS isolates were multidrug-resistant.
- Drug-resistant AHS may serve as a reservoir for antibiotic resistance genes, potentially impacting S. pneumoniae resistance, which warrants further investigation.
Objective:
We compared colonization and resistance rates of non-pneumococcal alpha-hemolytic streptococci (AHS) and Streptococcus pneumoniae in children receiving antibiotic therapy for acute otitis media.
Study Design:
Between December 1997 and September 1998, children 6 months to 6 years of age, diagnosed with acute otitis media were randomly assigned to receive amoxicillin/clavulanate (Augmentin) 45 mg/kg/d in 2 divided doses for 10 days or azithromycin (Zithromax), 10 mg/kg, once on the first day, followed by 5 mg/kg daily for 4 days. Nasopharyngeal swabs for culture were obtained before and at 2 weeks and 2 months after the start of therapy. Streptococci were identified by species, and antibiotic susceptibility was determined by the epsilometric test.
Results:
One hundred six children completed the 2-week follow-up and 2-month follow-up, respectively. The nasopharyngeal carriage rate of non-pneumococcal AHS increased from 14% before treatment to 32% at the 2-week follow-up (P =.02) and was similar in both treatment groups. In contrast, the carriage of S pneumoniae decreased from 51% before therapy to 27% at the 2-week follow-up (P =.002). The carriage of penicillin-resistant AHS strains (minimum inhibitory concentration > 1 microg/mL) increased from 9% before treatment to 26% at 2 weeks and 36% at 2 months.
Conclusions:
Amoxicillin/clavulanate and azithromycin therapy resulted in increased isolation of nasopharyngeal non-pneumococcal AHS, many of which were multidrug-resistant, in contrast to a decrease in pneumococcal carriage. This suggests that the competitive balance between these 2 groups of organisms was disturbed as a result of differential antibiotic susceptibility. The importance of drug-resistant AHS as a reservoir for resistance genes for S pneumoniae warrants further investigation.
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