Jove
Visualize
Contact Us
JoVE
x logofacebook logolinkedin logoyoutube logo
ABOUT JoVE
OverviewLeadershipBlogJoVE Help Center
AUTHORS
Publishing ProcessEditorial BoardScope & PoliciesPeer ReviewFAQSubmit
LIBRARIANS
TestimonialsSubscriptionsAccessResourcesLibrary Advisory BoardFAQ
RESEARCH
JoVE JournalMethods CollectionsJoVE Encyclopedia of ExperimentsArchive
EDUCATION
JoVE CoreJoVE BusinessJoVE Science EducationJoVE Lab ManualFaculty Resource CenterFaculty Site
Terms & Conditions of Use
Privacy Policy
Policies

Related Experiment Videos

Human BAC ends.

S Zhao1

  • 1The Institute for Genomic Research, 9712 Medical Center Drive, Rockville, MD 20850, USA. szhao@tigr.org

Nucleic Acids Research
|December 11, 1999
PubMed
Summary
This summary is machine-generated.

The Human BAC Ends database consolidates human BAC end sequences (BESs) and mapping data. This resource aids genomic research by integrating sequence, quality scores, and annotation for enhanced discovery.

Related Concept Videos

You might also read

Related Articles

Articles linked to this work by shared authors, journal, and citation graph.

Sort by
Same author

Differential regulation of five Pht1 phosphate transporters from maize (Zea mays L.).

Plant biology (Stuttgart, Germany)·2006
Same author

Characterization of antimicrobial-resistant Salmonella isolated from imported foods.

Journal of food protection·2006
Same author

Insertion mutation at the C-terminus of the serotonin transporter disrupts brain serotonin function and emotion-related behaviors in mice.

Neuroscience·2006
Same author

Genotyping of Campylobacter spp. from retail meats by pulsed-field gel electrophoresis and ribotyping.

Journal of applied microbiology·2006
Same author

Transcriptional responses to ionizing radiation reveal that p53R2 protects against radiation-induced mutagenesis in human lymphoblastoid cells.

Oncogene·2005
Same author

Characterization of Salmonella Typhimurium of animal origin obtained from the National Antimicrobial Resistance Monitoring System.

Foodborne pathogens and disease·2005
Same journal

Correction to 'New origin firing is inhibited by APC/CCdh1 activation in S-phase after severe replication stress'.

Nucleic acids research·2026
Same journal

VeloRM: disentangling pre- and post-splicing RNA modification dynamics at single-cell resolution.

Nucleic acids research·2026
Same journal

Accessibility of telomeric overhangs to stabilizing small-molecule ligands.

Nucleic acids research·2026
Same journal

Multivalent interactions mediate SNAIL transcription factor stimulation of the nucleosome deacetylase activity of the CoREST complex.

Nucleic acids research·2026
Same journal

Genome-wide mapping of DNA G-quadruplexes in Trypanosoma brucei chromatin reveals enrichment in coding regions and transcription start sites.

Nucleic acids research·2026
Same journal

Correction to 'The Gene Ontology knowledgebase in 2026'.

Nucleic acids research·2026
See all related articles

Area of Science:

  • Genomics
  • Bioinformatics

Background:

  • Human Genome Project generated vast amounts of sequence data.
  • Bacterial Artificial Chromosome (BAC) clones are crucial for mapping and sequencing large genomic regions.
  • BAC end sequences (BESs) provide valuable information for genome assembly and gene mapping.

Purpose of the Study:

  • To create a centralized, publicly accessible database of human BAC end sequences (BESs).
  • To integrate BESs with mapping data and sequence annotations for comprehensive analysis.
  • To facilitate efficient searching and retrieval of human genomic information.

Main Methods:

  • Compilation of non-redundant human BESs from major genomic research centers (TIGR, UW, CalTech).
  • Integration of BAC mapping data from various genome centers.

Related Experiment Videos

  • Annotation of BESs for repetitive elements, expressed sequence tags (ESTs), and sequence tagged sites (STSs).

    • Main Results:

    • The Human BAC Ends database provides access to curated human BESs.
    • Each entry includes sequence data, Phred quality scores, mapping information, and annotations.
    • The database offers links to external resources like GenBank, dbGSS, and GDB.

    Conclusions:

    • The Human BAC Ends database serves as a valuable resource for human genome research.
    • It enables efficient sequence and clone-based searches.
    • Free web accessibility and anonymous FTP support broad scientific utilization.