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Spin-stretching of DNA and protein molecules for detection by fluorescence and atomic force microscopy
H Yokota1, J Sunwoo, M Sarikaya
1Department of Molecular, University of Washington, Seattle, Washington 98195, USA. hiroki@anatomy.iupui.edu
Abstract:
We have developed a rapid and efficient way of stretching DNA and denatured protein molecules for detection by fluorescence microscopy and atomic force microscopy (AFM). In the described method, a viscous drag created by transient rotational flow stretches randomly coiled DNA molecules or denatured proteins. Stretching is achieved by dispensing a droplet of sample solution containing DNA or denatured protein on a MgCl2-soaked mica surface. We present fluorescent images of straightened lambdaDNA molecules and AFM images of stress-shared, reduced von Willebrand factor as well as straightened lambdaDNA. The described quick and reliable spin-stretching technique will find wide applications in the analysis of single biopolymer molecules.