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Published on: August 7, 2018
Identification of a novel human member of the DEAD box protein family
1Clinical Research Center, Samsung Biomedical Research Institute, Seoul, South Korea.
Abstract:
The cDNA library of human pancreatic islets was screened with sera from patients with insulin-dependent diabetes mellitus (IDDM). From the library screening, we isolated a novel cDNA, RNA helicase-like protein (RHELP), which exhibited strong sequence homology to p68 RNA helicase, a prototypic member of the DEAD (Asp-Glu-Ala-Asp) box protein family. Sequence analysis of the cDNA revealed that RHELP contained DEAD sequence motif and other conserved motifs of the DEAD box protein family, indicating that RHELP is a new member of this family. DEAD box-containing proteins are involved in the RNA processing, ribosome assembly, spermatogenesis, embryogenesis, and cell growth and division. RHELP showed 42% and 44% amino acid sequence identity to human p68 RNA helicase and yeast DBP2 RNA helicase, respectively, among the DEAD box protein family. Northern blot analysis revealed that RHELP is expressed in most tissues including the liver, lung, tonsil, thymus, and muscle in addition to the pancreatic islets. In vivo or in vitro functions of RHELP as a putative RNA helicase and its potential role as a diabetic autoantigen need to be further investigated.
Insights
Researchers identified a novel RNA helicase-like protein (RHELP) in human pancreatic islets. This protein, potentially involved in diabetes, is expressed in various tissues.
Area of Science:
- Molecular Biology
- Genetics
- Immunology
Background:
- Insulin-dependent diabetes mellitus (IDDM) is an autoimmune disease targeting pancreatic beta cells.
- RNA helicases are crucial for various cellular processes, including RNA metabolism and cell division.
- The DEAD box protein family comprises essential RNA helicases with diverse functions.
Purpose of the Study:
- To identify novel autoantigens in patients with insulin-dependent diabetes mellitus.
- To characterize a newly isolated cDNA exhibiting homology to RNA helicases.
- To investigate the expression pattern of the novel protein.
Main Methods:
- Screening of a human pancreatic islet cDNA library using sera from IDDM patients.
- Sequence analysis of the isolated cDNA to determine protein homology and identify conserved motifs.
- Northern blot analysis to assess tissue-specific gene expression.
Main Results:
- Isolation of a novel cDNA, designated RNA helicase-like protein (RHELP), from the IDDM patient library.
- RHELP shares significant sequence homology with known DEAD box RNA helicases, including human p68 and yeast DBP2.
- Northern blot analysis confirmed RHELP expression in multiple tissues, including pancreatic islets, liver, lung, tonsil, thymus, and muscle.
Conclusions:
- RHELP is a newly identified member of the DEAD box RNA helicase family.
- The protein's expression in pancreatic islets and its potential role in RNA processing warrant further investigation.
- RHELP's potential function as a diabetic autoantigen requires further in vivo and in vitro studies.
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