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Published on: July 15, 2011
Gene rearrangements in the vsa locus of Mycoplasma pulmonis
1Department of Comparative Medicine, University of Alabama at Birmingham, Birmingham, Alabama 35294-0019, USA.
Abstract:
The vsa genes of Mycoplasma pulmonis encode the V-1 lipoproteins. Most V-1 proteins contain repetitive domains and are thought to be involved in mycoplasma-host cell interactions. Previously, we have reported the isolation and characterization of six vsa genes comprising a 10-kb region of the genome of M. pulmonis strain KD735-15. In the current study, vsa-specific probes were used to clone several fragments from a genomic library of KD735-15 DNA and assemble a single 20-kb contig containing 11 vsa genes. The middle region of the vsa locus contains a large open reading frame (ORF) that is not a vsa gene and has undergone an internal deletion in some strains. The ORF is predicted to encode a membrane protein that may have a role in disease pathogenesis. To examine vsa genes in a strain of M. pulmonis that is unrelated to KD735-15, strain CT was studied. Through Southern hybridization and genomic cloning analyses, CT was found to possess homologs of the KD735-15 vsaA, -C, -E, and -F genes and two unique genes (vsaG and vsaH) that were not found in KD735-15. High-frequency, site-specific DNA inversions serve to regulate the phase-variable production of individual V-1 proteins. As a result of the sequence analysis of vsa recombination products, a model in which DNA inversion arises from strand exchange involving at least six nucleotides of the vrs box is proposed.
Insights
Mycoplasma pulmonis vsa genes encode V-1 lipoproteins involved in host interactions. DNA inversions regulate V-1 protein production, with a proposed model involving the vrs box.
Area of Science:
- Microbiology
- Genetics
- Molecular Biology
Background:
- Mycoplasma pulmonis vsa genes encode V-1 lipoproteins implicated in host cell interactions.
- Previous work characterized six vsa genes in M. pulmonis strain KD735-15.
Purpose of the Study:
- To characterize the vsa gene locus in M. pulmonis.
- To investigate vsa gene homologs in a different M. pulmonis strain (CT).
- To elucidate the mechanism of V-1 protein phase variation.
Main Methods:
- Genomic library construction and screening using vsa-specific probes.
- Southern hybridization and genomic cloning.
- DNA sequence analysis of vsa recombination products.
Main Results:
- Assembled a 20-kb contig containing 11 vsa genes and a novel ORF.
- Identified vsa homologs and unique genes (vsaG, vsaH) in strain CT.
- Proposed a model for DNA inversion-mediated regulation of V-1 protein production via the vrs box.
Conclusions:
- The vsa locus is complex and contains genes with potential roles in pathogenesis.
- Strain-specific variations in vsa gene content exist.
- Site-specific DNA inversions regulate V-1 lipoprotein expression through a proposed vrs box mechanism.
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