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Yeast As a Chassis for Developing Functional Assays to Study Human P53
Published on: August 4, 2019
Repression of RNA polymerase I transcription by the tumor suppressor p53
1Department of Molecular Microbiology and Immunology, Keck School of Medicine, University of Southern California, Los Angeles, California 90033, USA.
Abstract:
The tumor suppressor protein p53 is frequently inactivated in tumors. It functions as a transcriptional activator as well as a repressor for a number of viral and cellular promoters transcribed by RNA polymerase II (Pol II) and by RNA Pol III. Moreover, it appears that p53 also suppresses RNA Pol I transcription. In this study, we examined the molecular mechanism of Pol I transcriptional inhibition by p53. We show that wild-type, but not mutant, p53 can repress Pol I transcription from a human rRNA gene promoter in cotransfection assays. Furthermore, we show that recombinant p53 inhibits rRNA transcription in a cell-free transcription system. In agreement with these results, p53-null epithelial cells display an increased Pol I transcriptional activity compared to that of epithelial cells that express p53. However, both cell lines display comparable Pol I factor protein levels. Our biochemical analysis shows that p53 prevents the interaction between SL1 and UBF. Protein-protein interaction assays indicate that p53 binds to SL1, and this interaction is mostly mediated by direct contacts with TATA-binding protein and TAF(I)110. Moreover, template commitment assays show that while the formation of a UBF-SL1 complex can partially relieve the inhibition of transcription, only the assembly of a UBF-SL1-Pol I initiation complex on the rDNA promoter confers substantial protection against p53 inhibition. In summary, our results suggest that p53 represses RNA Pol I transcription by directly interfering with the assembly of a productive transcriptional machinery on the rRNA promoter.
Insights
The tumor suppressor protein p53 inhibits RNA Polymerase I (Pol I) transcription by blocking the assembly of essential transcription factors on rRNA genes. This mechanism explains how p53, a key regulator, impacts cellular processes and cancer development.
Area of Science:
- Molecular Biology
- Cancer Research
- Gene Regulation
Background:
- The tumor suppressor protein p53 is crucial in preventing cancer and is frequently inactivated in tumors.
- p53 acts as a transcriptional regulator for RNA Polymerase II (Pol II) and RNA Polymerase III (Pol III).
- Evidence suggests p53 also suppresses RNA Polymerase I (Pol I) transcription, a process vital for ribosome biogenesis.
Purpose of the Study:
- To elucidate the molecular mechanisms by which p53 inhibits RNA Pol I transcription.
- To investigate the interaction of p53 with components of the Pol I transcription machinery.
Main Methods:
- Cotransfection assays using human rRNA gene promoters.
- Cell-free transcription systems with recombinant p53.
- Protein-protein interaction assays and template commitment assays.
- Comparison of Pol I transcriptional activity in p53-null versus p53-expressing cells.
Main Results:
- Wild-type p53, but not mutant p53, represses human rRNA gene promoter activity.
- Recombinant p53 inhibits rRNA transcription in vitro.
- p53-null cells show higher Pol I activity than p53-expressing cells, despite similar Pol I factor levels.
- p53 directly binds to SL1 (specifically TBP and TAF(I)110) and inhibits the formation of the UBF-SL1-Pol I pre-initiation complex on the rDNA promoter.
Conclusions:
- p53 represses RNA Pol I transcription by directly interfering with the assembly of the transcriptional machinery on the rRNA promoter.
- The interaction between p53 and SL1 is a key step in inhibiting Pol I transcription.
- Understanding this mechanism provides insights into p53's role as a tumor suppressor and its regulation of ribosome biogenesis.
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