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Published on: January 23, 2019
Primary structure and expression of peroxisomal acetylspermidine oxidase in the methylotrophic yeast Candida boidinii
M Nishikawa1, T Hagishita, H Yurimoto
1Research Institute for Biological Sciences Okayama, Okayama, Japan. mnishikawa@mth.biglobe.ne.jp
Abstract:
Acetylspermidine oxidase (ASOD) belongs to a family of FAD-containing amine oxidases and catalyzes the oxidation of N-acetylated spermidine in polyamine metabolism. ASOD was purified to apparent homogeneity from cells of the methylotrophic yeast Candida boidinii grown on spermidine as the sole nitrogen source. C. boidinii ASOD catalyzed the oxidation of only N(1)-acetylspermidine. Based on partial amino acid sequences, oligonucleotide primers were designed for polymerase chain reaction, and the ASOD-encoding gene, ASO1, was cloned. The open reading frame encoding ASO1 was 1530 bp long and corresponded to a protein of 509 amino acid residues (calculated molecular mass=57167 Da). ASO1 contained a FAD-binding motif of G-A-G-I-A-G in the N-terminal region and carried an amino acid sequence of -S-K-L at the C-terminal, representing a typical peroxisome targeting signal 1. ASOD was localized in the peroxisomes in overexpressed C. boidinii. To our knowledge, this is the first report on the gene coding for ASOD that can catalyze the oxidation of N-acetylated polyamine as a substrate, from any type of organism.
Insights
Researchers purified acetylspermidine oxidase (ASOD) from yeast and cloned its gene, ASO1. This study is the first to identify the gene for ASOD, an enzyme crucial for N-acetylated polyamine metabolism.
Area of Science:
- Biochemistry
- Molecular Biology
- Yeast Genetics
Background:
- Acetylspermidine oxidase (ASOD) is an FAD-containing amine oxidase involved in polyamine metabolism.
- It catalyzes the oxidation of N-acetylated spermidine.
Purpose of the Study:
- To purify ASOD from Candida boidinii.
- To clone and characterize the gene encoding ASOD.
- To determine the substrate specificity and localization of ASOD.
Main Methods:
- Purification of ASOD from Candida boidinii.
- Gene cloning using polymerase chain reaction (PCR) based on partial amino acid sequences.
- Sequence analysis of the ASO1 gene and its encoded protein.
- Localization studies in overexpressed Candida boidinii cells.
Main Results:
- ASOD was purified to homogeneity from Candida boidinii.
- The enzyme specifically oxidized N(1)-acetylspermidine.
- The ASOD-encoding gene, ASO1, was cloned. It is 1530 bp long, encoding a 509-amino acid protein (57.167 kDa).
- ASO1 contains a FAD-binding motif and a peroxisome targeting signal 1 (PTS1).
- ASOD was localized to peroxisomes in overexpressed cells.
Conclusions:
- This is the first report of a gene encoding ASOD capable of oxidizing N-acetylated polyamines.
- The characterized gene and enzyme provide insights into polyamine metabolism and peroxisomal function in yeast.
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