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Updated: Aug 5, 2026

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Microcrystallography of Protein Crystals and In Cellulo Diffraction
Published on: July 21, 2017
SIR99, a program for the automatic solution of small and large crystal structures
1Dipartimento di Scienze della Terra, Piazza Università, 06100 Perugia, Italy.
Summary
The SIR99 program introduces new phasing algorithms for solving molecular structures. It enables ab initio structure solution for small proteins without prior information, improving crystallographic structure determination.
Area of Science:
- Crystallography and Structural Biology
- Computational Chemistry and Molecular Modeling
Background:
- Accurate molecular structure determination is crucial for understanding biological processes and designing new therapeutics.
- Traditional methods for solving crystal structures can be computationally intensive and may require prior structural information.
Purpose of the Study:
- To describe the moduli and flow diagram of the SIR99 program.
- To introduce novel phasing algorithms for direct and reciprocal space.
- To enable ab initio structure solution for small proteins with minimal user intervention.
Main Methods:
- Development and implementation of new phasing algorithms within the SIR99 program.
- Testing the efficiency of algorithms, including the role of the tangent formula.
- Exploration of both direct and reciprocal space approaches for structure solution.
Main Results:
- The cooperative work of new algorithms effectively solves structures of small and large molecules.
- Demonstrated capability for ab initio structure solution of small proteins without prior data.
- Clarified the role of the tangent formula in the phasing process.
Conclusions:
- SIR99 offers an efficient and automated approach to crystallographic structure determination.
- The new phasing algorithms significantly advance the capability for solving challenging molecular structures.
- Practical information on computational requirements is provided for users.

