Related Experiment Video
Updated: Oct 13, 2026

Studying RNA Interactors of Protein Kinase RNA-Activated during the Mammalian Cell Cycle
Published on: March 5, 2019
Protein synthesis shut-off induced by influenza virus infection is independent of PKR activity
T Zürcher1, R M Marión, J Ortín
1Centro Nacional de Biotecnología (CSIC), Campus de Cantoblanco, 28049 Madrid, Spain.
Abstract:
The role of PKR activity in influenza virus-induced cell shut-off was studied by infection of PKR(+) or PKR(-) cell cultures and metabolic labeling in vivo. No differences in the synthesis of viral proteins or the decay of cellular protein synthesis were observed. To investigate the relevance of the inhibition of cellular pre-mRNA polyadenylation and nucleocytoplasmic transport in virus-induced shut-off, we carried out similar experiments with mutant viruses lacking C-terminal sequences of NS1 protein. No differences in the shut-off induced by mutant versus wild-type viruses were observed, indicating that these nuclear events are not relevant for shut-off. The analysis of cytoplasmic mRNA stability indicated that the accumulation of viral mRNA during the infection correlated with the progressive decay of cellular mRNA, in both the wild type and an NS1 deletion mutant.
Insights
Influenza virus infection does not rely on PKR activity or nuclear events for host cell shut-off. Viral mRNA accumulation correlates with cellular mRNA decay, regardless of NS1 protein mutations.
Area of Science:
- Virology
- Molecular Biology
- Cell Biology
Background:
- Influenza virus infection triggers host cell shut-off, a process impacting cellular functions.
- The role of Protein Kinase R (PKR) and nuclear events in this shut-off mechanism remains incompletely understood.
Purpose of the Study:
- To investigate the role of PKR activity in influenza virus-induced host cell shut-off.
- To determine the relevance of inhibited pre-mRNA polyadenylation and nucleocytoplasmic transport in virus-induced shut-off.
Main Methods:
- Infection of PKR-positive (PKR(+)) and PKR-negative (PKR(-)) cell cultures.
- Metabolic labeling in vivo to assess protein synthesis.
- Experiments using influenza viruses with mutations in the NS1 protein (lacking C-terminal sequences).
- Analysis of cytoplasmic mRNA stability.
Main Results:
- No significant differences in viral protein synthesis or cellular protein synthesis decay were observed between PKR(+) and PKR(-) cells.
- Mutant influenza viruses lacking NS1 C-terminal sequences did not alter the shut-off phenotype compared to wild-type viruses.
- Accumulation of viral mRNA during infection correlated with progressive decay of cellular mRNA in both wild-type and NS1 mutant infections.
Conclusions:
- PKR activity is not essential for influenza virus-induced host cell shut-off.
- Nuclear events like pre-mRNA polyadenylation and nucleocytoplasmic transport inhibition are not critical for this shut-off.
- The decay of cellular mRNA in the cytoplasm is a key feature accompanying viral mRNA accumulation during influenza infection.
More Related Videos
Related Concept Videos
Inhibitors of Viral Protein Synthesis
Leaky Scanning
Inhibitors Of Virion Release
Initiation of Translation
First, the initiator tRNA must be selected from the pool of elongator tRNAs by eukaryotic initiation factor 2 (eIF2). The initiator tRNA (Met-tRNAi) has conserved sequence elements including modified bases at...
Regulation of the Unfolded Protein Response
Regulation of Expression at Multiple Steps

