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Reverse Yeast Two-hybrid System to Identify Mammalian Nuclear Receptor Residues that Interact with Ligands and/or Antagonists
Published on: November 16, 2013
Role of the LXCXE binding site in Rb function
1Division of Molecular Oncology, Departments of Medicine and Cell Biology, Washington University School of Medicine, St. Louis, Missouri 63110, USA.
Abstract:
Oncoproteins from DNA tumor viruses such as adenovirus E1a, simian virus 40 T antigen, and human papillomavirus E7 contain an LXCXE sequence, which they use to bind the retinoblastoma protein (Rb) and inhibit its function. Cellular proteins such as histone deacetylases 1 and 2 (HDAC1 and -2) also contain an LXCXE-like sequence, which they use to interact with Rb. The LXCXE binding site in Rb was mutated to assess its role in Rb function. These mutations inhibited binding to HDAC1 and -2, which each contain an LXCXE-like sequence, but had no effect on binding to HDAC3, which lacks an LXCXE-like sequence. Mutation of the LXCXE binding site inhibited active transcriptional repression by Rb and prevented it from effectively repressing the cyclin E and A gene promoters. In contrast, mutations in the LXCXE binding site did not prevent Rb from binding and inactivating E2F. Thus, the LXCXE mutations appear to separate Rb's ability to bind and inactivate E2F from its ability to efficiently recruit HDAC1 and -2 and actively repress transcription. In transient assays, several of the LXCXE binding site mutants caused an increase in the percentage of cells in G(1) by flow cytometry, suggesting that they can arrest cells. However, this effect was transient, as none of the mutants affected cell proliferation in longer-term assays examining bromodeoxyuridine incorporation or colony formation. Our results then suggest that the LXCXE binding site is important for full Rb function. Mutation of the LXCXE binding site does not inhibit binding of the BRG1 ATPase component of the SWI/SNF nucleosome remodeling complex, which has been shown previously to be important for Rb function. Indeed, overexpression of BRG1 and Rb in cells deficient for the proteins led to stable growth inhibition, suggesting a cooperative role for SWI/SNF and the LXCXE binding site in efficient Rb function.
Insights
The retinoblastoma protein (Rb) LXCXE binding site is crucial for recruiting histone deacetylases (HDACs) and active gene repression, but not for binding E2F. This site is important for full Rb function and works with SWI/SNF for growth inhibition.
Area of Science:
- Molecular Biology
- Cell Biology
- Virology
Background:
- Viral oncoproteins and cellular proteins bind the retinoblastoma protein (Rb) via an LXCXE motif.
- This interaction is critical for regulating cell cycle and gene expression.
Purpose of the Study:
- To investigate the role of the LXCXE binding site in Rb function.
- To determine how mutations in this site affect Rb's interactions and cellular activities.
Main Methods:
- Site-directed mutagenesis of the LXCXE binding site in Rb.
- Assessing binding affinities for HDACs and E2F.
- Analyzing transcriptional repression of cyclin E and A promoters.
- Flow cytometry and bromodeoxyuridine incorporation assays for cell cycle analysis.
Main Results:
- LXCXE mutations disrupted binding to HDAC1 and -2, but not HDAC3 or E2F.
- Mutations impaired active transcriptional repression and repression of cyclin E/A promoters.
- Transient G1 arrest was observed, but long-term proliferation was unaffected.
- Binding to BRG1 and SWI/SNF complex remained intact.
Conclusions:
- The LXCXE binding site is essential for Rb's ability to recruit HDACs and actively repress transcription.
- Rb's interaction with E2F is separable from its LXCXE-dependent functions.
- Full Rb function requires cooperation between the LXCXE binding site and the SWI/SNF complex.
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