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Monitoring Stub1-Mediated Pexophagy
Published on: May 12, 2023
PEX3 is the causal gene responsible for peroxisome membrane assembly-defective Zellweger syndrome of complementation
K Ghaedi1, M Honsho, N Shimozawa
1Department of Biology, Faculty of Sciences, Kyushu University, Fukuoka, Japan; and CREST, Japan Science and Technology Corporation, Tokyo, Japan.
Insights
Peroxisome biogenesis disorders (PBDs) are genetic diseases impacting peroxisome assembly. This study identifies the PEX3 gene mutation as a cause of a specific PBD subtype, offering insights into disease mechanisms.
Area of Science:
- Cell Biology
- Genetics
- Biochemistry
Background:
- Peroxisome biogenesis disorders (PBDs) are a group of severe autosomal recessive diseases.
- Defects in peroxisome assembly lead to conditions like Zellweger syndrome (ZS).
- Thirteen genotypes of PBDs have been identified, highlighting genetic heterogeneity.
Purpose of the Study:
- To identify the genetic cause of a specific PBD subtype, complementation group G (CG-G) Zellweger syndrome.
- To investigate the role of the PEX3 gene in peroxisome assembly and PBD pathogenesis.
Main Methods:
- Fibroblast culture from a patient with CG-G ZS (PBDG-02).
- Expression of human peroxin Pex3p cDNA in patient fibroblasts and a Chinese hamster ovary (CHO) pex3 mutant cell line.
- Genomic PCR analysis to identify mutations in the PEX3 gene.
Main Results:
- Expression of Pex3p restored peroxisome biogenesis in patient fibroblasts.
- The PBDG-02 patient had a homozygous inactivating mutation in the PEX3 gene: a 97-bp deletion causing a frameshift and premature termination.
- Genomic analysis revealed a splice site mutation affecting exon 11 of the PEX3 gene.
- PEX3 cDNA derived from the patient's fibroblasts showed defective peroxisome-restoring activity.
Conclusions:
- The PEX3 gene is a novel pathogenic gene responsible for complementation group G (CG-G) PBDs.
- Mutations in PEX3 disrupt peroxisome assembly, leading to PBDs.
- This finding advances the understanding of PBD genetics and provides a molecular basis for CG-G ZS.
Abstract:
Peroxisome biogenesis disorders (PBDs) such as Zellweger syndrome (ZS) and neonatal adrenoleukodystrophy are autosomal recessive diseases caused by defects in peroxisome assembly, for which 13 genotypes have been identified. Expression of the human peroxin Pex3p cDNA encoding a 373-amino-acid peroxisomal membrane protein morphologically and biochemically restored peroxisome biogenesis, including peroxisomal membrane assembly, in fibroblasts from PBDG-02, a patient with complementation group G (CG-G) ZS. Patient PBDG-02 carried a homozygous, inactivating mutation-a 97-bp deletion of nucleotide residues at positions 942-1038-resulting in a 32-amino-acid truncation and in a frameshift inducing both a 3-amino-acid substitution and a termination codon. Genomic PCR analysis revealed mutation of T-->G at eight bases upstream of the splicing site at the boundary of intron 10 and exon 11 of PEX3 gene, giving rise to a deletion of all of exon 11. When assessed by expression in a pex3 mutant of Chinese hamster ovary cells and the patient's fibroblasts, PBDG-02-derived PEX3 cDNA was found to be defective in peroxisome-restoring activity. These results provide evidence that PEX3 is a novel, pathogenic gene responsible for CG-G PBDs.
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