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Evaluating hydrogen-bond donor strength.
1BioByte Corporation, 201 W. Fourth Street, Suite 204, Claremont, California 91711, USA. clogp@biobyte.com
Journal of Pharmaceutical Sciences
|October 24, 2000
Summary
A new parameter, epsilon alpha, quantifies hydrogen-bond donor (HBD) strength in solutes. This measure, derived from octanol and chloroform partitioning, aids in modeling biological interactions by accounting for solute-solvent preferences.
Area of Science:
- Physical Chemistry
- Computational Chemistry
- Drug Discovery
Background:
- Accurate modeling of biological interactions requires understanding solute properties like hydrogen-bond donor (HBD) strength.
- Solvent choice significantly influences solute partitioning and interaction modeling.
- Octanol and chloroform are common solvents with distinct properties affecting solute interactions.
Purpose of the Study:
- To develop a quantitative parameter for measuring the hydrogen-bond donor (HBD) strength of solutes.
- To establish a method for modeling biological interactions based on solute HBD strength.
- To compare the HBD donating capabilities of various solutes using a novel parameter.
Main Methods:
- Utilizing the partitioning of solutes between octanol and chloroform (log P(oct) and log P(clf)).
- Accounting for solute excess alkane affinity (XAA) and molecular volume.
- Calculating the difference between log P(oct) and log P(clf) to determine the effective HBD sum, termed epsilon alpha.
Main Results:
- Octanol's HBA oxygen and alkane character favor solutes with HBD groups and excess alkane affinity.
- Chloroform's lower cavity formation energy favors larger solutes.
- The parameter epsilon alpha effectively measures the sum of HBD, correlating with Abraham's operator alpha(2)(H).
Conclusions:
- The epsilon alpha parameter provides a reliable measure of solute HBD strength.
- This parameter aids in predicting and modeling solute behavior in biological systems.
- The findings offer a refined approach to understanding solute-solvent interactions and their biological implications.