SOS mutator activity: unequal mutagenesis on leading and lagging strands
M Maliszewska-Tkaczyk1, P Jonczyk, M Bialoskorska
1Institute of Biochemistry and Biophysics, Polish Academy of Sciences, Pawinskiego 5A, 02-106 Warsaw, Poland.
Abstract:
A major pathway of mutagenesis in Escherichia coli is mediated by the inducible SOS response. Current models of SOS mutagenesis invoke the interaction of RecA and UmuD'(2)C proteins with a stalled DNA replication complex at sites of DNA lesions or poorly extendable terminal mismatches, resulting in an (error-prone) continuation of DNA synthesis. The precise mechanisms of SOS-mediated lesion bypass or mismatch extension are not known. Here, we have studied mutagenesis on the E. coli chromosome in recA730 strains. In recA730 strains, the SOS system is expressed constitutively, resulting in a spontaneous mutator effect (SOS mutator) because of reduced replication fidelity. We investigated whether during SOS mutator activity replication fidelity might be altered differentially in the leading and lagging strand of replication. Pairs of recA730 strains were constructed differing in the orientation of the lac operon relative to the origin of replication. The strains were also mismatch-repair defective (mutL) to facilitate scoring of replication errors. Within each pair, a given lac sequence is replicated by the leading-strand machinery in one orientation and by the lagging-strand machinery in the other orientation. Measurements of defined lac mutant frequencies in such pairs revealed large differences between the two orientations. Furthermore, in all cases, the frequency bias was the opposite of that seen in normal cells. We suggest that, for the lacZ target used in this study, SOS mutator activity operates with very different efficiency in the two strands. Specifically, the lagging strand of replication appears most susceptible to the SOS mutator effect.
Insights
The inducible SOS response in E. coli causes mutagenesis. Constitutive SOS activation (SOS mutator) in recA730 strains leads to reduced replication fidelity, with the lagging strand being most susceptible to these errors.
Area of Science:
- Molecular Biology
- Genetics
- Microbiology
Background:
- Mutagenesis in Escherichia coli is significantly influenced by the inducible SOS response.
- Current models propose RecA and UmuD'(2)C protein interactions with stalled replication complexes mediate error-prone DNA synthesis.
- The exact mechanisms of SOS-mediated DNA lesion bypass and mismatch extension remain unclear.
Purpose of the Study:
- To investigate differential effects on replication fidelity between leading and lagging strands during constitutive SOS activation (SOS mutator) in E. coli.
- To elucidate the strand-specific mechanisms underlying SOS mutator activity.
Main Methods:
- Utilized recA730 E. coli strains exhibiting constitutive SOS response and a spontaneous mutator effect.
- Constructed strain pairs with differing lac operon orientations relative to the replication origin to assess leading vs. lagging strand replication.
- Employed mismatch-repair defective (mutL) strains to efficiently detect replication errors in the lacZ gene.
Main Results:
- Observed significant differences in lac mutant frequencies between the two orientations, indicating strand-specific mutagenesis.
- Found that the direction of the mutation frequency bias was reversed compared to normal E. coli cells.
- Identified the lagging strand as being particularly vulnerable to the SOS mutator effect.
Conclusions:
- SOS mutator activity exhibits significantly different efficiencies on the leading and lagging strands of DNA replication.
- The lagging strand is disproportionately affected by the SOS mutator effect, leading to increased mutagenesis.
- These findings provide critical insights into the strand-biased mechanisms of DNA repair and mutagenesis in E. coli.
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