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Quantitative Analysis of Alternative Pre-mRNA Splicing in Mouse Brain Sections Using RNA In Situ Hybridization Assay
Published on: August 26, 2018
Heterogeneity within animal thioredoxin reductases. Evidence for alternative first exon splicing
Q A Sun1, F Zappacosta, V M Factor
1Department of Biochemistry, University of Nebraska, Lincoln, Nebraska 68588, USA.
Animal thioredoxin reductases (TRs) exhibit significant heterogeneity due to alternative splicing of first exons. This evolutionary conserved mechanism generates diverse TR isoforms, influencing their cellular location and expression regulation.
Area of Science:
- Biochemistry
- Molecular Biology
- Genetics
Background:
- Animal thioredoxin reductases (TRs) are crucial selenocysteine-containing flavoenzymes involved in redox homeostasis.
- Mammalian TRs, including TR1 (cytosolic) and TR3 (mitochondrial), were previously characterized as homodimers of 55-57 kDa subunits.
Purpose of the Study:
- To investigate the heterogeneity of animal thioredoxin reductases (TRs).
- To identify novel forms and isoforms of TR1 and TR3.
- To elucidate the genetic mechanisms underlying TR heterogeneity.
Main Methods:
- Electrophoretic, immunoblot, and mass spectrometry analyses of TR1.
- Homology analyses of TR1 cDNA and mRNA.
- Comparative analysis of TR gene structures and expression in mouse, rat, human, and Drosophila.
Main Results:
- TR1 from various sources showed heterogeneity, including a 67-kDa band.
- A novel mouse TR1 cDNA encoding a 67-kDa selenoprotein subunit was identified.
- Multiple mRNA isoforms of TR1, TR3, and Drosophila TR resulted from alternative first exon splicing, leading to predicted mitochondrial and cytosolic proteins.
- Human TR3 gene overlaps with the COMT gene, involving shared first exon sequences.
Conclusions:
- Animal TRs exhibit remarkable heterogeneity, largely due to alternative first exon splicing, an evolutionarily conserved mechanism.
- This splicing mechanism contributes to the complex regulation of TR expression and their specific localization in organelles and cell types.
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