Structure and mechanism of peptide methionine sulfoxide reductase, an "anti-oxidation" enzyme

W T Lowther1, N Brot, H Weissbach

  • 1Institute of Molecular Biology, Howard Hughes Medical Institute and Department of Physics, University of Oregon, Eugene, Oregon 97403, USA.

Biochemistry
|November 7, 2000
PubMed

Insights

Peptide methionine sulfoxide reductase (MsrA) repairs oxidative damage to proteins, protecting cells from death. Structural studies reveal its unique catalytic mechanism involving cysteine residues and conformational changes.

Area of Science:

  • Biochemistry
  • Structural Biology
  • Molecular Biology

Background:

  • Oxidative stress causes damage to proteins, including methionine oxidation.
  • Peptide methionine sulfoxide reductase (MsrA) is a key enzyme that repairs methionine oxidation.
  • Cellular protection against oxidative damage is crucial for survival.

Purpose of the Study:

  • To elucidate the structural basis of bovine MsrA function.
  • To understand the catalytic mechanism of MsrA in repairing protein oxidation.
  • To investigate the role of cysteine residues and conformational changes in MsrA activity.

Main Methods:

  • X-ray crystallography was used to determine the structure of bovine MsrA.
  • Analysis of two different MsrA modifications provided insights into its conformational flexibility.
  • Biochemical assays were employed to study the catalytic mechanism.

Main Results:

  • The structures revealed three cysteine residues near the active site.
  • Conformational changes in a glycine-rich C-terminal tail facilitate the convergence of thiols for catalysis.
  • A unique thiol-disulfide exchange mechanism involving essential cysteines and conserved residues was supported.

Conclusions:

  • Bovine MsrA employs a distinct catalytic mechanism to reverse methionine oxidation.
  • Structural insights highlight the importance of conformational flexibility and specific residues in MsrA's protective function.
  • Understanding MsrA's mechanism can inform strategies against oxidative stress-related damage.

Related Concept Videos

Protein Modifications in the RER01:26

Protein Modifications in the RER

Modification of secretory and transmembrane proteins entering the rough ER begins in the ER lumen. These modifications aid in protein folding and stabilize the acquired tertiary structure. Protein modifications in the rough ER co-occur at different stages of protein folding.
Broadly, these modifications can be categorized into four main categories — glycosylation, formation of disulfide bonds, assembly of protein subunits, and specific proteolytic cleavages like removal of signal sequences.
Oxidation of Phenols to Quinones01:17

Oxidation of Phenols to Quinones

In the presence of oxidizing agents, phenols are oxidized to quinones. Quinones can be easily reduced back to phenols using mild reducing agents. The electron-donating hydroxyl group enhances the reactivity of the aromatic ring, enabling oxidation of the ring even in the absence of an α hydrogen.
o-hydroxy phenols are oxidized to o-quinones and p-hydroxy phenols to p-quinones. Such redox reactions involve the transfer of two electrons and two protons. The reversible redox property is crucial in...
Sulfur Assimilation01:20

Sulfur Assimilation

Sulfur is an essential element in biological systems, contributing to synthesizing key biomolecules, including amino acids such as cysteine and methionine, and cofactors such as coenzyme A and biotin. Microorganisms primarily assimilate sulfur as sulfate (SO₄²⁻) from the environment, which must undergo a series of biochemical transformations before it can be incorporated into cellular components. As sulfate is highly oxidized, it must undergo assimilatory sulfate reduction to become...
Oxidation and Reduction of Organic Molecules01:19

Oxidation and Reduction of Organic Molecules

Energy production within a cell involves many coordinated chemical pathways. Most of these pathways are combinations of oxidation and reduction reactions, which occur at the same time. An oxidation reaction strips an electron from an atom in a compound, and the addition of this electron to another compound is a reduction reaction. Because oxidation and reduction usually occur together, these pairs of reactions are called redox reactions.
The removal of an electron from a molecule, results in a...
Phase I Reactions: Reductive Reactions01:27

Phase I Reactions: Reductive Reactions

Phase I biotransformation reductive reactions are chemical processes that modify drugs by introducing or revealing polar functional groups via reduction. Enzymes called reductases catalyze these reactions, playing a pivotal role in drug metabolism by transforming lipophilic drugs into more polar, water-soluble metabolites for easy excretion. An essential type of reductive reaction is the carbonyl group reduction, where aldehydes and ketones are reduced to alcohols. An example is the...
Reactions at the Benzylic Position: Oxidation and Reduction00:59

Reactions at the Benzylic Position: Oxidation and Reduction

The benzylic position describes the position of a carbon atom attached directly to a benzene ring. Benzene by itself does not undergo oxidation. In contrast, the benzylic carbon is quite reactive in the presence of strong oxidizing agents such as KMnO4 or H2CrO4. Therefore, alkylbenzenes are readily oxidized to benzoic acid, irrespective of the type of alkyl groups.