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Published on: October 2, 2012
Homologous functional expression of cryptic phaG from Pseudomonas oleovorans establishes the transacylase-mediated
N Hoffmann1, A Steinbüchel, B H Rehm
1Institut für Mikrobiologie, Westfälischen Wilhelms-Universität Münster, Germany.
Abstract:
Various pseudomonads are capable of the synthesis of polyhydroxyalkanoate (PHA), composed of medium chain length (MCL) 3-hydroxy fatty acids (C6-C14), when grown on simple carbon sources such as, for example, gluconate or acetate. In Pseudomonas putida, the fatty acid de novo synthesis and PHA synthesis are linked by the transacylase PhaG. Southern hybridization experiments with digoxigenin-labeled phaG(Pp) from P. putida and genomic DNA from various pseudomonads indicate that phaG homologues are present in various other pseudomonads. Although P. oleovorans does not accumulate PHA(MCL) from non-related carbon sources, its genomic DNA reveals a strong hybridization signal. We employed PCR to amplify this phaG homologue. The respective PCR product comprising the coding region of phaG(Po) was cloned into pBBR1MCS-2, resulting in plasmid pBHR84. DNA sequencing revealed that putative PhaG(Po) from P. oleovorans exhibited about 95% amino acid sequence identity to PhaG(Pp) from P. putida. Reverse transcriptase-PCR analysis demonstrated that phaG(Po) was not transcribed even tinder inducing conditions, i.e. in the presence of gluconate as carbon source, whereas induction of phaG(Pp) transcription was obtained in P. putida. When octanoate was used as sole carbon source, only low levels of phaG mRNA were detected in P. putida. Plasmid pBHR84 complemented the phaG-negative mutant PhaG(N)-21 from P. putida. Interestingly, reintroduction of phaG(Po) under lac promoter control into the natural host P. oleovorans established PHA(MCL) synthesis from non-related carbon sources in this bacterium. These data indicated that phaG(Po) in P. oleovorans is not functionally expressed and does not exert its original function.
Insights
Pseudomonas oleovorans possesses a phaG gene homologue, but it is not functionally expressed, preventing polyhydroxyalkanoate (PHA) synthesis from simple carbon sources. Introducing this gene under a different promoter enabled PHA production.
Area of Science:
- Microbiology
- Biochemistry
Background:
- Various pseudomonads synthesize polyhydroxyalkanoates (PHA), a type of biopolymer, from simple carbon sources.
- The transacylase PhaG links fatty acid synthesis and PHA production in Pseudomonas putida.
- Homologues of the phaG gene are found in other pseudomonads, including Pseudomonas oleovorans.
Purpose of the Study:
- To investigate the functional expression of the phaG homologue in Pseudomonas oleovorans.
- To determine why P. oleovorans does not accumulate PHA from non-related carbon sources despite possessing a phaG homologue.
Main Methods:
- Southern hybridization to detect phaG homologues.
- Polymerase chain reaction (PCR) to amplify the P. oleovorans phaG gene (phaG(Po)).
- DNA sequencing, reverse transcriptase PCR (RT-PCR), and complementation assays.
Main Results:
- A phaG homologue (phaG(Po)) was identified in P. oleovorans with high sequence identity to P. putida's phaG (phaG(Pp)).
- phaG(Po) was not transcribed under inducing conditions in P. oleovorans, unlike phaG(Pp) in P. putida.
- Complementation of a phaG-negative mutant with phaG(Po) and subsequent reintroduction into P. oleovorans under a lac promoter enabled PHA synthesis.
Conclusions:
- The phaG gene in P. oleovorans is not functionally expressed in its native context.
- The lack of functional phaG expression prevents PHA accumulation from simple carbon sources in P. oleovorans.
- PHA synthesis can be restored in P. oleovorans by expressing its phaG homologue under an inducible promoter.
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