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Identification of Homologous Recombination Events in Mouse Embryonic Stem Cells Using Southern Blotting and Polymerase Chain Reaction
Published on: November 20, 2018
Molecular cloning of mouse ERK5/BMK1 splice variants and characterization of ERK5 functional domains
1Center for Cardiovascular Research, University of Rochester School of Medicine and Dentistry, Rochester, New York 14642, USA.
Abstract:
The mitogen-activated protein kinases (MAPKs) play important roles in regulation of cell growth and survival. Human MAPK 5 (ERK5) or Big MAP kinase 1 (BMK1) is a recently cloned member of the MAPK family. To identify ERK5-related kinases, we searched the GenBanktrade mark expressed sequence tag (EST) data base for mouse cDNAs with homology to human ERK5. A full-length mouse cDNA that was highly homologous to the human ERK5 was identified. Further analysis of ERK5 polymerase chain reaction products generated from mouse embryo cDNA yielded three mouse ERK5 cDNAs (mERK5a, mERK5b, and mERK5c). Sequence analysis showed that these cDNAs are alternative splice products of the mouse ERK5 gene. Interestingly, expressed mERK5b and mERK5c act as dominant negative inhibitors based on inhibition of mERK5a kinase activity and mERK5a-mediated MEF2C transactivation. However, the physiological significance of mERK5b and mERK5c is not fully understood. Further investigation using these mouse ERK5 splice variants and other constructed mutants identified functional roles of several regions of mERK5, which appear to be important for protein-protein interaction and intracellular localization. Specifically, we found that the long C-terminal tail, which contains a putative nuclear localization signal, is not required for activation and kinase activity but is responsible for the activation of nuclear transcription factor MEF2C due to nuclear targeting. In addition, the N-terminal domain spanning amino acids (aa) 1-77 is important for cytoplasmic targeting; the domain from aa 78 to 139 is required for association with the upstream kinase MEK5; and the domain from aa 140-406 is necessary for oligomerization. Taken together, these observations indicate that ERK5 is regulated by distinct mechanisms determined by its unique structure and presumably the presence of multiple splice variants.
Insights
Researchers identified three mouse ERK5 (extracellular signal-regulated kinase 5) splice variants, with two acting as dominant negative inhibitors. These variants and specific domains regulate ERK5
Area of Science:
- Molecular Biology
- Cell Signaling
- Protein Kinases
Background:
- Mitogen-activated protein kinases (MAPKs) are crucial for cell growth and survival.
- Human MAPK 5 (ERK5/BMK1) is a recently identified member of the MAPK family.
- Understanding ERK5 regulation is key to deciphering cellular processes.
Purpose of the Study:
- To identify and characterize mouse ERK5 (mERK5) splice variants.
- To elucidate the functional roles of different mERK5 domains.
- To investigate the regulatory mechanisms of mERK5.
Main Methods:
- Searched GenBank EST database for mouse cDNAs homologous to human ERK5.
- Generated and analyzed mERK5 splice variants (mERK5a, mERK5b, mERK5c) using PCR and sequence analysis.
- Utilized mutant constructs to identify functional domains of mERK5.
Main Results:
- Identified three mERK5 splice variants (mERK5a, mERK5b, mERK5c) arising from alternative splicing.
- Demonstrated that mERK5b and mERK5c act as dominant negative inhibitors of mERK5a.
- Mapped functional domains crucial for protein-protein interaction, intracellular localization, and MEF2C transactivation.
Conclusions:
- mERK5 exhibits complex regulation through alternative splicing and distinct functional domains.
- The C-terminal tail is essential for nuclear targeting and MEF2C activation.
- Specific N-terminal and internal domains govern cytoplasmic localization, MEK5 association, and oligomerization.

