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Protein Membrane Overlay Assay: A Protocol to Test Interaction Between Soluble and Insoluble Proteins in vitro
Published on: August 14, 2011
Alfalfa mosaic virus replicase proteins P1 and P2 interact and colocalize at the vacuolar membrane
M W Van Der Heijden1, J E Carette, P J Reinhoud
1Institute of Molecular Plant Sciences, Gorlaeus Laboratories, Leiden University, 2300 RA Leiden, The Netherlands.
Abstract:
Replication of Alfalfa mosaic virus (AMV) RNAs depends on the virus-encoded proteins P1 and P2. P1 contains methyltransferase- and helicase-like domains, and P2 contains a polymerase-like domain. Coimmunoprecipitation experiments revealed an interaction between in vitro translated-P1 and P2 and showed that these proteins are present together in fractions with RNA-dependent RNA polymerase activity. A deletion analysis in the yeast two-hybrid system showed that in P1 the C-terminal sequence of 509 amino acids with the helicase domain was necessary for the interaction. In P2, the sequence of the N-terminal 241 aa was required for the interaction. In infected protoplasts, P1 and P2 colocalized at a membrane structure that was identified as the tonoplast (i.e., the membrane that surrounds the vacuoles) by using a tonoplast intrinsic protein as a marker in immunofluorescence studies. While P1 was exclusively localized on the tonoplast, P2 was found both at the tonoplast and at other locations in the cell. As Brome mosaic virus replication complexes have been found to be associated with the endoplasmic reticulum (M. A. Restrepo-Hartwig and P. Ahlquist, J. Virol. 70:8908-8916, 1996), viruses in the family Bromoviridae apparently select different cellular membranes for the assembly of their replication complexes.
Insights
Alfalfa mosaic virus RNA replication requires proteins P1 and P2, which interact and localize to the tonoplast membrane. This study identifies specific protein domains involved in their interaction and cellular localization during viral replication.
Area of Science:
- Plant virology
- Molecular biology
- Cell biology
Background:
- Alfalfa mosaic virus (AMV) RNA replication is mediated by viral proteins P1 and P2.
- P1 possesses methyltransferase and helicase-like domains, while P2 contains a polymerase-like domain.
Purpose of the Study:
- To investigate the interaction between AMV proteins P1 and P2.
- To identify the domains responsible for the P1-P2 interaction.
- To determine the cellular localization of P1 and P2 during viral replication.
Main Methods:
- Coommunoprecipitation assays to detect protein interactions.
- Yeast two-hybrid system with deletion analysis to map interaction domains.
- Immunofluorescence microscopy in infected protoplasts to visualize protein localization.
Main Results:
- Proteins P1 and P2 interact and are found in RNA-dependent RNA polymerase fractions.
- The C-terminal helicase domain of P1 and the N-terminal region of P2 are crucial for interaction.
- P1 and P2 colocalize at the tonoplast, a vacuolar membrane structure.
Conclusions:
- AMV replication involves the interaction of P1 and P2, with specific domains mediating this association.
- The tonoplast serves as a key cellular membrane for AMV replication complex assembly.
- Different members of the Bromoviridae family may utilize distinct cellular membranes for replication complex formation.
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