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Updated: Jul 24, 2026

From Constructs to Crystals – Towards Structure Determination of β-barrel Outer Membrane Proteins
Published on: July 4, 2016
Crystallization and preliminary X-ray crystallographic analysis of type II dehydroquinase from Helicobacter pylori
1School of Chemistry and Molecular Engineering, Seoul National University, Seoul 151-742, South Korea.
Abstract:
The enzyme 3-dehydroquinase catalyzes the interconversion of 3-dehydroquinate and 3-dehydroshikimate. The enzymes are classified into two groups, type I and type II, which have different biochemical and biophysical properties and act with different mechanisms. The type II dehydroquinase of Helicobacter pylori, a dodecameric enzyme, was overexpressed in Escherichia coli. The recombinant protein has been crystallized at 296 K using polyethylene glycol (PEG) 4000 as a precipitant. Native X-ray diffraction data have been collected to 2.5 A resolution using synchrotron radiation. The crystals are cubic and belong to the space group P4(2)32, with unit-cell parameters a = b = c = 98.91 A. The asymmetric unit contains one subunit of recombinant type II dehydroquinase, with a corresponding V(M) of 2.18 A(3) Da(-1) and a solvent content of 43.6%.

