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Related Experiment Videos

Functional and structural genomics using PEDANT.

D Frishman1, K Albermann, J Hani

  • 1GSF-Forschungszentrum für Umwelt und Gesundheit, Munich Information Center for Protein Sequences, Martinsried, Germany. frishman@mips.biochem.mpg.de

Bioinformatics (Oxford, England)
|February 27, 2001
PubMed
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The PEDANT system offers automated, high-throughput analysis of biological sequences and genomic data. It provides a comprehensive database with functional and structural information, supporting genome projects and bioinformatics research.

Area of Science:

  • Bioinformatics
  • Genomics
  • Structural Biology

Background:

  • High demand for rapid, accurate biological sequence analysis.
  • Need for integrated genomic databases with functional and structural data.

Purpose of the Study:

  • Describe the PEDANT software system and its associated genome analysis server.
  • Highlight capabilities for high-throughput analysis of large biological sequence sets.

Main Methods:

  • Automated processing of biological sequence data.
  • Integration of diverse bioinformatics methods.
  • Manual refinement and categorization of gene products.
  • Development of hyperlinked protein reports and advanced viewers.

Main Results:

Related Experiment Videos

  • PEDANT provides automated, extensible analysis with manual refinement options.
  • The PEDANT genome database disseminates information on 80 genomic sequences.
  • Offers extensive structural genomics data with over 300,000 predicted proteins.

Conclusions:

  • PEDANT serves as a collaborative environment for genome sequencing projects.
  • Facilitates research by enabling correlation of gene product properties via SQL queries.
  • Represents a leading web resource for structural genomics.