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Updated: May 11, 2026

A Deep-sequencing-assisted, Spontaneous Suppressor Screen in the Fission Yeast Schizosaccharomyces pombe
Published on: March 7, 2019
Suppression of spontaneous chromosomal rearrangements by S phase checkpoint functions in Saccharomyces cerevisiae
K Myung1, A Datta, R D Kolodner
1Ludwig Institute for Cancer Research, Cancer Center and Department of Medicine, University of California-San Diego School of Medicine, La Jolla, CA 92093, USA.
Abstract:
Cancer cells show increased genome rearrangements, although it is unclear what defects cause these rearrangements. Mutations in Saccharomyces cerevisiae RFC5, DPB11, MEC1, DDC2 MEC3, RAD53, CHK1, PDS1, and DUN1 increased the rate of genome rearrangements up to 200-fold whereas mutations in RAD9, RAD17, RAD24, BUB3, and MAD3 had little effect. The rearrangements were primarily deletion of a portion of a chromosome arm along with TEL1-dependent addition of a new telomere. tel1 mutations increased the proportion of translocations observed, and in some cases showed synergistic interactions when combined with mutations that increased the genome rearrangement rate. These data suggest that one role of S phase checkpoint functions in normal cells is to suppress spontaneous genome rearrangements resulting from DNA replication errors.
Insights
Defects in S phase checkpoint genes significantly increase genome rearrangement rates in yeast, primarily causing deletions and telomere additions. These findings highlight the role of cell cycle checkpoints in preventing DNA replication errors and maintaining genome stability.
Area of Science:
- Genetics
- Molecular Biology
- Cell Biology
Background:
- Cancer cells exhibit elevated rates of genome rearrangements.
- The underlying genetic defects causing these rearrangements are not fully understood.
Purpose of the Study:
- To investigate the role of specific genes in Saccharomyces cerevisiae in causing genome rearrangements.
- To elucidate the mechanisms by which DNA replication errors lead to genomic instability.
Main Methods:
- Utilized Saccharomyces cerevisiae as a model organism.
- Introduced mutations in various genes involved in DNA replication and cell cycle checkpoints.
- Quantified the rate of genome rearrangements, including deletions and translocations.
Main Results:
- Mutations in RFC5, DPB11, MEC1, DDC2, MEC3, RAD53, CHK1, PDS1, and DUN1 increased genome rearrangement rates up to 200-fold.
- Mutations in RAD9, RAD17, RAD24, BUB3, and MAD3 had minimal effect on rearrangement rates.
- Rearrangements primarily involved chromosome arm deletions with TEL1-dependent telomere additions.
- tel1 mutations increased translocations and showed synergistic effects with other mutations.
Conclusions:
- S phase checkpoint functions are crucial for suppressing spontaneous genome rearrangements arising from DNA replication errors.
- Specific genes within the S phase checkpoint pathway play a critical role in maintaining genome stability.
- Understanding these mechanisms can provide insights into cancer development and genomic instability.
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