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Updated: Aug 1, 2026

Peptide:MHC Tetramer-based Enrichment of Epitope-specific T cells
Published on: October 22, 2012
Multiple antigen-specific processing pathways for activating naive CD8+ T cells in vivo
C C Norbury1, M F Princiotta, I Bacik
1Laboratory of Viral Diseases, National Institute of Allergy and Infectious Diseases, National Institutes of Health, Bethesda, MD 20892, USA.
This study reveals that antigen presentation in vivo differs from in vitro models, highlighting determinant-specific pathways for generating antiviral T cell responses and suggesting cross-priming mechanisms.
Area of Science:
- Immunology
- Molecular Biology
- Vaccine Development
Background:
- Current understanding of viral antigen processing for MHC class I presentation relies heavily on in vitro studies using nonprofessional antigen-presenting cells (pAPCs).
- This in vitro approach is limited as it doesn't fully replicate in vivo immune responses where pAPCs activate naive CD8(+) T cells.
Purpose of the Study:
- To investigate the in vivo antigen processing and presentation by pAPCs, focusing on the role of the Transporter Associated with Protein Processing (TAP).
- To understand how antigen presentation pathways in vivo differ from in vitro findings, particularly for vaccine design.
Main Methods:
- Utilized TAP1-deficient (TAP1(-/-)) mice to assess the immunogenicity of model antigens synthesized by recombinant vaccinia viruses.
- Compared in vitro and in vivo antigen presentation efficiencies, including TAP-dependent and independent pathways.
Main Results:
- Demonstrated a correlation between TAP-independent antigen presentation in vitro and naive T cell activation in vivo.
- Provided the first in vivo evidence for proteolytic processing of antigenic peptides within the secretory pathway.
- Observed TAP-independent in vivo presentation of a specific peptide (SIINFEKL) from ovalbumin (OVA), contrasting with its strict TAP dependence in vitro.
- Showed that the same peptide presented within a fusion protein remained TAP-dependent in vivo.
Conclusions:
- Established the existence of determinant-specific processing pathways crucial for generating antiviral T cell responses in vivo.
- Identified potential protein-specific differences in antigen presentation, with cross-priming suggested as a likely underlying mechanism.
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