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Updated: Jul 10, 2026

Process Optimization using High Throughput Automated Micro-Bioreactors in Chinese Hamster Ovary Cell Cultivation
Published on: May 18, 2020
Using historical data for bioprocess optimization: modeling wine characteristics using artificial neural networks and
S Vlassides1, J G Ferrier, D E Block
1Department of Viticulture and Enology, University of California, One Shields Avenue, Davis, CA 95616, USA.
Abstract:
Optimization of fermentation processes is a difficult task that relies on an understanding of the complex effects of processing inputs on productivity and quality outputs. Because of the complexity of these biological systems, traditional optimization methods utilizing mathematical models and statistically designed experiments are less effective, especially on a production scale. At the same time, information is being collected on a regular basis during the course of normal manufacturing and process development that is rarely fully utilized. We are developing an optimization method in which historical process data is used to train an artificial neural network for correlation of processing inputs and outputs. Subsequently, an optimization routine is used in conjunction with the trained neural network to find optimal processing conditions given the desired product characteristics and any constraints on inputs. Wine processing is being used as a case study for this work. Using data from wine produced in our pilot winery over the past 3 years, we have demonstrated that trained neural networks can be used successfully to predict the yeast-fermentation kinetics, as well as chemical and sensory properties of the finished wine, based solely on the properties of the grapes and the intended processing. To accomplish this, a hybrid neural network training method, Stop Training with Validation (STV), has been developed to find the most desirable neural network architecture and training level. As industrial historical data will not be evenly spaced over the entire possible search space, we have also investigated the ability of the trained neural networks to interpolate and extrapolate with data not used during training. Because a company will utilize its own existing process data for this method, the result of this work will be a general fermentation optimization method that can be applied to fermentation processes to improve quality and productivity.
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