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Updated: May 12, 2026

Lighting Up the Pathways to Caspase Activation Using Bimolecular Fluorescence Complementation
Published on: March 5, 2018
Structural basis of caspase-7 inhibition by XIAP
J Chai1, E Shiozaki, S M Srinivasula
1Department of Molecular Biology, Princeton University, Lewis Thomas Laboratory, Washington Road, Princeton, NJ 08544, USA.
Abstract:
The inhibitor of apoptosis (IAP) proteins suppress cell death by inhibiting the catalytic activity of caspases. Here we present the crystal structure of caspase-7 in complex with a potent inhibitory fragment from XIAP at 2.45 A resolution. An 18-residue XIAP peptide binds the catalytic groove of caspase-7, making extensive contacts to the residues that are essential for its catalytic activity. Strikingly, despite a reversal of relative orientation, a subset of interactions between caspase-7 and XIAP closely resemble those between caspase-7 and its tetrapeptide inhibitor DEVD-CHO. Our biochemical and structural analyses reveal that the BIR domains are dispensable for the inhibition of caspase-3 and -7. This study provides a structural basis for the design of the next-generation caspase inhibitors.
Insights
Inhibitor of apoptosis (IAP) proteins block cell death by inhibiting caspases. This study reveals the crystal structure of XIAP peptide binding caspase-7, offering insights for designing new caspase inhibitors.
Area of Science:
- Biochemistry
- Structural Biology
- Molecular Biology
Background:
- Inhibitor of apoptosis (IAP) proteins regulate apoptosis by targeting caspases.
- Caspase activity is crucial for programmed cell death.
- Understanding caspase-inhibitor interactions is key for therapeutic development.
Purpose of the Study:
- To elucidate the structural basis of caspase-7 inhibition by XIAP.
- To investigate the role of BIR domains in caspase inhibition.
- To provide a foundation for designing novel caspase inhibitors.
Main Methods:
- X-ray crystallography to determine the structure of caspase-7 and XIAP peptide complex.
- Biochemical assays to assess inhibitory activity.
- Structural analysis of protein-protein interactions.
Main Results:
- The crystal structure of caspase-7 complexed with an 18-residue XIAP peptide was determined at 2.45 A resolution.
- The XIAP peptide binds to the catalytic groove of caspase-7, mimicking interactions of known inhibitors.
- Biochemical and structural data indicate BIR domains are not essential for inhibiting caspase-3 and -7.
Conclusions:
- The XIAP peptide interaction with caspase-7 provides a novel structural model for caspase inhibition.
- The BIR domains are dispensable for the inhibitory function of XIAP against caspase-3 and -7.
- This structural insight facilitates the rational design of next-generation apoptosis-modulating drugs.
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