Related Experiment Video
Updated: Jul 14, 2026

Isolation, Enrichment, and Maintenance of Medulloblastoma Stem Cells
Published on: September 1, 2010
Activation of expression of hedgehog target genes in basal cell carcinomas
J M Bonifas1, S Pennypacker, P T Chuang
1Department of Dermatology, San Francisco General Hospital, California, USA.
Abstract:
Mutations in hedgehog signaling pathway genes, especially PTC1 and SMO, are pivotal to the development of basal cell carcinomas. The study of basal cell carcinoma gene expression not only may elucidate mechanisms by which hedgehog signaling abnormalities produce aberrant tumor cell behavior but also can provide data on in vivo hedgehog target gene control in humans. We have found, in comparison with normal skin, that basal cell carcinomas have increased levels of mRNA for PTC1, GLI1, HIP, WNT2B, and WNT5a; decreased levels of mRNA for c-MYC, c-FOS, and WNT4; and unchanged levels of mRNA for PTC2, GLI2, WNT7B, and BMP2 and 4. These findings suggest that mutations in hedgehog signaling pathway genes may exert both cell autonomous and indirect effects and indicate that basal cell carcinoma tumor cells have a phenotype that at least in some aspects resembles that of epidermal stem cells.
Insights
Mutations in hedgehog pathway genes drive basal cell carcinoma. Gene expression analysis reveals altered mRNA levels in tumors, suggesting stem cell-like properties and complex signaling effects.
Area of Science:
- Oncology
- Molecular Biology
- Dermatology
Background:
- Mutations in hedgehog signaling pathway genes, particularly Patched 1 (PTC1) and Smoothened (SMO), are critical drivers of basal cell carcinoma (BCC) development.
- Understanding gene expression in BCC is crucial for elucidating how hedgehog pathway abnormalities lead to aberrant tumor cell behavior and for studying human in vivo hedgehog target gene control.
Purpose of the Study:
- To investigate and compare gene expression profiles in basal cell carcinomas versus normal skin.
- To identify specific genes and pathways affected by hedgehog signaling abnormalities in BCC.
- To explore the phenotypic characteristics of BCC tumor cells in relation to epidermal stem cells.
Main Methods:
- Quantitative analysis of messenger RNA (mRNA) levels for various genes, including hedgehog pathway components (PTC1, SMO, GLI1, GLI2), WNT family members (WNT2B, WNT5a, WNT4, WNT7B), and other relevant genes (HIP, c-MYC, c-FOS, BMP2, BMP4).
- Comparison of gene expression data between tumor samples (basal cell carcinomas) and control samples (normal skin).
Main Results:
- Basal cell carcinomas exhibited significantly increased mRNA levels for PTC1, GLI1, HIP, WNT2B, and WNT5a compared to normal skin.
- Decreased mRNA levels were observed for c-MYC, c-FOS, and WNT4 in BCCs relative to normal skin.
- mRNA levels for PTC2, GLI2, WNT7B, and BMP2/4 remained unchanged between BCCs and normal skin.
Conclusions:
- The observed gene expression changes in BCCs suggest that hedgehog signaling pathway mutations can have both direct (cell autonomous) and indirect effects on tumor development.
- The distinct gene expression signature in BCCs indicates a cellular phenotype that shares similarities with epidermal stem cells.
- These findings provide insights into the molecular mechanisms underlying BCC pathogenesis and potential therapeutic targets.
Related Concept Videos
Notch Signaling Pathway
The Notch gene came into the limelight in 1914 after the discovery that its mutation in Drosophila melanogaster leads to a serrated (or "notched") wing margin phenotype. It was not until 1985...
Hedgehog Signaling Pathway
Regulation of Angiogenesis and Blood Supply
Hedgehog Signaling Pathway
Cadherins in Tissue Organization
Cell Sorting During Development
Cell sorting plays an...
Role Of Notch Signalling In Intestinal Stem Cell Renewal
Direct cell-to-cell contact is needed for the activation of Notch signaling. The signal is initiated when a notch ligand binds to a receptor on an adjacent cell, also...

