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Updated: Aug 1, 2026

Expression, Purification, and Liposome Binding of Budding Yeast SNX-BAR Heterodimers
Published on: December 6, 2019
Pex12p of Saccharomyces cerevisiae is a component of a multi-protein complex essential for peroxisomal matrix protein
M Albertini1, W Girzalsky, M Veenhuis
1Abteilung für Zellbiochemie, Medizinische Fakultät der Ruhr-Universität Bochum, Germany.
Insights
We identified a new yeast mutant, pex12, crucial for peroxisome biogenesis. This mutant is essential for importing matrix proteins via PTS1 and PTS2 pathways, highlighting Pex12p
Area of Science:
- Cell Biology
- Molecular Biology
- Biochemistry
Background:
- Peroxisome biogenesis is essential for cellular function.
- Protein import into peroxisomes is a complex process involving specific pathways.
Purpose of the Study:
- To identify and characterize novel genes involved in peroxisome biogenesis.
- To elucidate the function of the PEX12 gene in Saccharomyces cerevisiae.
Main Methods:
- Isolation of mutants defective in peroxisome biogenesis.
- Gene cloning by functional complementation.
- Protein localization studies using immunofluorescence.
- Co-immunoprecipitation and yeast two-hybrid assays.
Main Results:
- The pex12 deletion strain is defective in peroxisomal matrix protein import via PTS1 and PTS2 pathways.
- PEX12 encodes an integral peroxisomal membrane protein, ScPex12p, with a RING finger domain.
- ScPex12p interacts with other key components of the peroxisomal protein import machinery, including Pex10p, Pex5p, Pex13p, and Pex14p.
- Peroxisomal membrane biogenesis is not impaired in pex12 deletion cells.
Conclusions:
- Pex12p is a vital component of the peroxisomal protein translocation machinery.
- The interaction of Pex12p with other import proteins is crucial for matrix protein targeting.
- Saccharomyces cerevisiae Pex12p is orthologous to Pex12 proteins in other species, suggesting conserved function.
Abstract:
We have isolated the Saccharomyces cerevisiae pex12-1 mutant from a screen to identify mutants defective in peroxisome biogenesis. The pex12delta deletion strain fails to import peroxisomal matrix proteins through both the PTS1 and PTS2 pathway. The PEX12 gene was cloned by functional complementation of the pex12-1 mutant strain and encodes a polypeptide of 399 amino acids. ScPex12p is orthologous to Pex12 proteins from other species and like its orthologues, S. cerevisiae Pex12p contains a degenerate RING finger domain of the C3HC4 type in its essential carboxy-terminus. Localization studies demonstrate that Pex12p is an integral peroxisomal membrane protein, with its NH2-terminus facing the peroxisomal lumen and with its COOH-terminus facing the cytosol. Pex12p-deficient cells retain particular structures that contain peroxisomal membrane proteins consistent with the existence of peroxisomal membrane remnants ("ghosts") in pex12A null mutant cells. This finding indicates that pex12delta cells are not impaired in peroxisomal membrane biogenesis. In immunoisolation experiments Pex12p was co-purified with the RING finger protein Pex10p, the PTS1 receptor Pex5p and the docking proteins for the PTS1 and the PTS2 receptor at the peroxisomal membrane, Pex13p and Pex14p. Furthermore, two-hybrid experiments suggest that the two RING finger domains are sufficient for the Pex10p-Pex12p interaction. Our results suggest that Pex12p is a component of the peroxisomal translocation machinery for matrix proteins.
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