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Updated: Aug 17, 2026

Measuring In Vitro ATPase Activity for Enzymatic Characterization
Published on: August 23, 2016
Enzymatic activation of autotaxin by divalent cations without EF-hand loop region involvement
Abstract:
Autotaxin (ATX) is a recently described member of the nucleotide pyrophosphatase/phosphodiesterase (NPP) family of proteins with potent tumor cell motility-stimulating activity. Like other NPPs, ATX is a glycoprotein with peptide sequences homologous to the catalytic site of bovine intestinal alkaline phosphodiesterase (PDE) and the loop region of an EF-hand motif. The PDE active site of ATX has been associated with the motility-stimulating activity of ATX. In this study, we examined the roles of the EF-hand loop region and of divalent cations on the enzymatic activities of ATX. Ca(2+) or Mg(2+) was each demonstrated to increase the PDE activity of ATX in a concentration-dependent manner, whereas incubation of ATX with chelating agents abolished this activity, indicating a requirement for divalent cations. Non-linear regression analysis of enzyme kinetic data indicated that addition of these divalent cations increases reaction velocity predominantly through an effect on V(max.) Three mutant proteins, Ala(740)-, Ala(742)-, and Ala(751)-ATX, in the EF-hand loop region of ATX had enzymatic activity comparable to that of the wild-type protein. A deletion mutation of the entire loop region resulted in slightly reduced PDE activity but normal motility-stimulating activity. However, the PDE activity of this same deletion mutant remained sensitive to augmentation by cations, strongly implying that cations exert their effect by interactions outside of the EF-hand loop region.
Insights
Autotaxin (ATX), an enzyme stimulating tumor cell motility, requires divalent cations like Ca(2+) or Mg(2+) for optimal activity. These cations enhance enzyme kinetics, with effects likely mediated outside the EF-hand loop region.
Area of Science:
- Biochemistry
- Molecular Biology
- Enzymology
Background:
- Autotaxin (ATX) is a nucleotide pyrophosphatase/phosphodiesterase (NPP) enzyme.
- ATX exhibits potent tumor cell motility-stimulating activity.
- ATX possesses homology to phosphodiesterase (PDE) catalytic sites and an EF-hand motif.
Purpose of the Study:
- To investigate the influence of the EF-hand loop region on ATX enzymatic activity.
- To determine the role of divalent cations in modulating ATX enzymatic functions.
- To elucidate the mechanism by which cations affect ATX activity.
Main Methods:
- Enzyme kinetics assays were performed on wild-type and mutant ATX proteins.
- The effects of calcium (Ca2+) and magnesium (Mg2+) ions were assessed.
- Chelating agents were used to evaluate the requirement for divalent cations.
- Site-directed mutagenesis and deletion mutations were introduced in the EF-hand loop region.
Main Results:
- Divalent cations (Ca2+, Mg2+) significantly increased ATX PDE activity in a concentration-dependent manner.
- Chelation of divalent cations abolished ATX enzymatic activity.
- Mutations within the EF-hand loop region did not significantly alter enzymatic activity.
- A deletion mutant of the EF-hand loop retained cation sensitivity, suggesting cation interaction sites are outside this region.
Conclusions:
- Divalent cations are essential for optimal ATX enzymatic activity.
- The EF-hand loop region is not the primary site for cation-mediated enhancement of ATX activity.
- Cation-dependent regulation of ATX activity likely involves interactions with other parts of the protein.
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