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Updated: Oct 7, 2026

CAPRRESI: Chimera Assembly by Plasmid Recovery and Restriction Enzyme Site Insertion
Published on: June 25, 2017
Characterization of two autoreplicative regions of the IncHI2 plasmid R478: RepHI2A and RepHI1A((R478))
David T Page1, Kenneth F Whelan1, Emer Colleran1
1Department of Microbiology, National University of Ireland, Galway, Ireland1.
Abstract:
Plasmids of the incompatibility groups HI and HII (IncH plasmids) generally confer multiple antibiotic resistances upon their host pathogenic strain. IncHI group plasmids are distinguished by their property of optimal transfer by conjugation at temperatures below 30 degrees C, allowing for the spread of multiple antibiotic resistance outside their host natural environment, the gut. Plasmids of the IncHI1 subgroup encode multiple replicons. In the present study it is shown that the prototype IncHI2 subgroup plasmid, R478, contains at least two iteron-controlled autoreplicative regions, RepHI2A and RepHI1A((R478)). The DNA sequence and the molecular characteristics of each replicon region are described. RepHI2A is unique to plasmids of the IncHI2 subgroup and contains an unusually large number of iteron sequences downstream of the replication initiator gene. The nucleotide sequence of the replication initiator gene and of the iterons within RepHI1A((R478)) show very close similarity with those of the previously reported RepHI1A replicon of the IncHI1 subgroup plasmid R27. The presence of RepHI1A((R478)) on R478 most likely accounts for the observed incompatibility between R478 and plasmids of the IncHI1 subgroup. These are the first autoreplicative regions from an IncHI2 subgroup plasmid to be described.
Insights
The study identifies two novel autoreplicative regions, RepHI2A and RepHI1A, in the IncHI2 plasmid R478. This finding advances our understanding of plasmid replication and incompatibility in antibiotic-resistant bacteria.
Area of Science:
- Molecular Biology
- Microbiology
- Genetics
Background:
- Incompatibility group HI (IncH) plasmids are known to confer multiple antibiotic resistances.
- These plasmids facilitate the spread of antibiotic resistance genes through conjugation, particularly at lower temperatures.
- IncHI1 plasmids possess multiple replicons, while IncHI2 plasmids have been less characterized regarding their replication mechanisms.
Purpose of the Study:
- To characterize the autoreplicative regions of the IncHI2 subgroup plasmid R478.
- To elucidate the molecular basis for incompatibility between IncHI2 and IncHI1 plasmids.
Main Methods:
- DNA sequencing of plasmid R478.
- Analysis of replication initiator genes and iteron sequences.
- Comparative analysis with known IncHI1 replicons.
Main Results:
- Identified two autoreplicative regions in R478: RepHI2A and RepHI1A((R478)).
- RepHI2A is unique to IncHI2 plasmids and features numerous iterons.
- RepHI1A((R478)) shares high similarity with the RepHI1A replicon of IncHI1 plasmids, explaining observed incompatibility.
Conclusions:
- These are the first described autoreplicative regions from an IncHI2 plasmid.
- The presence of RepHI1A((R478)) explains the incompatibility between R478 and IncHI1 plasmids.
- Characterization of these replicons provides insights into plasmid diversity and evolution.
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