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Published on: July 22, 2016
Bayesian model selection: analysis of a survival model with a surviving fraction
H Seltman1, J Greenhouse, L Wasserman
1Department of Statistics, Carnegie Mellon University, 232 Baker Hall, Pittsburgh, PA 15213-3890, U.S.A. hseltman@stat.cmu.edu
This study introduces a Bayesian method for comparing models of survival data with a surviving fraction, applicable to clinical trials like depression recurrence. The approach uses Markov chain methods and Bayes factors for robust model selection.
Area of Science:
- Biostatistics
- Clinical Trials
- Psychiatric Research
Background:
- Survival analysis is crucial for clinical trials, especially when dealing with a proportion of subjects who do not experience the event of interest (surviving fraction).
- Comparing statistical models is essential for accurately interpreting complex survival data and identifying significant factors.
- Bayesian frameworks offer a robust approach for model comparison, incorporating prior knowledge and providing probability distributions for parameters.
Purpose of the Study:
- To present a Bayesian methodology for comparing statistical models in the context of survival analysis with a surviving fraction.
- To illustrate the application of this methodology using a real-world case study from a randomized clinical trial on depression recurrence.
- To compare different models that account for covariate effects on the surviving fraction and/or the hazard rate.
Main Methods:
- Simulation of posterior distributions using Metropolis-within-Gibbs Markov chain Monte Carlo (MCMC) methods.
- Application of Bayes factors, calculated via bridge sampling, for model comparison.
- Evaluation of models assessing covariate effects on the log odds of the surviving fraction, log hazard rate, both, or neither.
Main Results:
- The study demonstrates a practical application of Bayesian model comparison for survival data with a surviving fraction.
- The methodology effectively differentiates between models with varying covariate effects in a clinical trial setting.
- Bayes factors provide a quantitative measure for selecting the most appropriate model.
Conclusions:
- The proposed Bayesian methodology provides a rigorous framework for model comparison in survival analysis with a surviving fraction.
- This approach is particularly valuable for analyzing data from randomized controlled trials, such as those investigating depression recurrence.
- The use of MCMC simulation and bridge sampling facilitates the practical implementation of this statistical technique.
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