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Genome-Wide Analysis of DNA Methylation in Gastrointestinal Cancer
Published on: September 18, 2020
Concurrent hypermethylation of multiple tumor-related genes in gastric carcinoma and adjacent normal tissues
1Department of Medicine & Therapeutics, Chinese University of Hong Kong, Prince of Wales Hospital, Shatin, New Territories, Hong Kong SAR. wkleung@cuhk.edu.hk
Background:
Transcriptional silencing by CpG-island hypermethylation now is believed to be an important mechanism of tumorigenesis. To date, studies on CpG-island hypermethylation in gastric carcinoma and adjacent normal tissues are few.
Methods:
The authors examined 5 gastric carcinoma cell lines, 26 frozen gastric carcinoma tissues and their adjacent nontumor area for concurrent CpG-island hypermethylation in 6 tumor-related genes (p15, p16, E-cadherin, GST-pi, hMLH1, and VHL) by methylation-specific polymerase chain reaction. Nontumorous gastric tissues from 10 gastritis patients were used as controls.
Results:
Hypermethylation was not detected in any tissue taken from gastritis patients but was identified in all 5 cell lines and in 24 (92.3%) gastric carcinoma patients. CpG-island methylation in tumor-related genes also was detected in 7 out of the 25 adjacent normal tissues from cancer patients. Hypermethylation of E-cadherin, p15, and p16 were detected more frequently than GST-pi and hMLH1, whereas aberrant methylation of VHL was not detected. Concurrent hypermethylation in 2 or more tumor-related genes was detected in 3 out of the 5 gastric carcinoma cell lines, 22 (84.6%) tumor samples, and 5 (20%) adjacent gastric tissues. Eighteen (69.2%) tumor samples showed hypermethylation in >or= 3 genes.
Conclusions:
The current study showed that concurrent hypermethylation of multiple tumor-related genes is detected frequently in gastric carcinoma and adjacent normal tissues. Study findings suggested that a mechanism that leads to dysregulation in CpG-island methylation is likely to be involved in the early gastric carcinogenesis process.
Insights
CpG-island hypermethylation is common in gastric cancer and nearby tissues, affecting multiple genes. This suggests epigenetic dysregulation plays a role in early stomach cancer development.
Area of Science:
- Oncology
- Epigenetics
- Molecular Biology
Background:
- Transcriptional silencing via CpG-island hypermethylation is a key tumorigenesis mechanism.
- Limited research exists on CpG-island hypermethylation in gastric carcinoma and adjacent tissues.
Purpose of the Study:
- To investigate concurrent CpG-island hypermethylation in tumor-related genes in gastric carcinoma.
- To assess the prevalence of hypermethylation in tumor tissues, adjacent normal tissues, and control samples.
Main Methods:
- Analyzed 5 gastric carcinoma cell lines, 26 tumor tissues, and adjacent normal tissues.
- Examined hypermethylation in 6 tumor-related genes (p15, p16, E-cadherin, GST-pi, hMLH1, VHL) using methylation-specific PCR.
- Utilized 10 non-tumorous gastric tissues from gastritis patients as controls.
Main Results:
- Hypermethylation was absent in gastritis tissues but present in all 5 cell lines and 92.3% of gastric carcinoma tissues.
- CpG-island methylation was found in 7/25 adjacent normal tissues.
- Concurrent hypermethylation of multiple genes was frequent in tumor samples (84.6%) and adjacent tissues (20%).
Conclusions:
- Concurrent hypermethylation of multiple tumor-related genes is prevalent in gastric carcinoma and adjacent normal tissues.
- Suggests dysregulation of CpG-island methylation is involved in early gastric carcinogenesis.
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