The gene encoding the major viral structural protein stimulates recombination in polyomavirus DNA

M Bélanger1, S Charbonneau, D Gendron

  • 1Department of Microbiology and Infectious Diseases, Université de Sherbrooke, Sherbrooke, Québec, J1H 5N4, Canada.

Virology
|July 5, 2001
PubMed

Insights

A novel chimeric DNA molecule, RmI, encodes a unique polypeptide (VmP1) essential for releasing infectious polyoma DNA. This VmP1 protein, distinct from VP1, facilitates DNA release, suggesting a new role in viral replication.

Area of Science:

  • Molecular Biology
  • Virology
  • Genetics

Background:

  • The RmI molecule is a chimeric DNA construct based on the polyoma genome.
  • It contains a duplicated VP1-coding region and an insert of murine DNA (Ins).
  • RmI undergoes intramolecular recombination in mouse cells to produce infectious, unit-length polyoma DNA.

Purpose of the Study:

  • To investigate the function of the polypeptide encoded by RmI.
  • To determine the role of this polypeptide in the release of polyoma DNA.
  • To elucidate the mechanism of DNA release and its relation to viral replication.

Main Methods:

  • Transfection of RmI into mouse cells.
  • Site-directed mutagenesis of the VmP1-coding sequence and the VP1-coding sequence.
  • Analysis of polyoma DNA yield and infectivity post-transfection.

Main Results:

  • RmI encodes a 337-amino acid polypeptide, VmP1, comprising the N-terminal 328 amino acids of VP1 and 9 amino acids from Ins.
  • Mutations in the VmP1-coding sequence significantly reduce polyoma DNA yield.
  • Mutations in the non-VmP1 portion of the VP1-coding sequence do not affect DNA yield but abolish infectivity.

Conclusions:

  • The release of polyoma DNA from RmI requires a function of VmP1 distinct from VP1's role in virus assembly.
  • VmP1, arising post-recombination, likely mediates this DNA release function.
  • VmP1 may act in conjunction with VP2 to stimulate recombination and facilitate DNA release.

Related Concept Videos

Retrovirus Life Cycles01:10

Retrovirus Life Cycles

Retroviruses have a single-stranded RNA genome that undergoes a special form of replication. Once the retrovirus has entered the host cell, an enzyme called reverse transcriptase synthesizes double-stranded DNA from the retroviral RNA genome. This DNA copy of the genome is then integrated into the host’s genome inside the nucleus via an enzyme called integrase. Consequently, the retroviral genome is transcribed into RNA whenever the host’s genome is transcribed, allowing the retrovirus to...
Viral Recombination00:57

Viral Recombination

Cells are sometimes infected by more than one virus at once. When two viruses disassemble to expose their genomes for replication in the same cell, similar regions of their genomes can pair together and exchange sequences in a process called recombination. Alternatively, viruses with segmented genomes can swap segments in a process called reassortment.
Conservative Site-specific Recombination and Phase Variation02:53

Conservative Site-specific Recombination and Phase Variation

Because the DNA segments are cut and reorganized in a direction-specific manner, site-specific recombination has emerged as an efficient genetic engineering technique. Flippase and Cyclization recombinases or Flp and Cre, respectively, are two members of the tyrosine recombinase family derived from bacteriophages, that are used to mediate site-specific DNA insertions, deletions, and targeted expression of proteins in mammalian cell lines.
The recognition sites for Cre recombinase called LoxP...
Leaky Scanning02:28

Leaky Scanning

During most eukaryotic translation processes, the small 40S ribosome subunit scans an mRNA from its 5' end until it encounters the first start AUG codon. The large 60S ribosomal subunit then joins the smaller one to initiate protein synthesis. The location of the translation initiation is largely determined by the nucleotides near the start codon as there may be multiple translation initiation sites present on the mRNA.  Marilyn Kozak discovered that the sequence RCCAUGG (where R stands for...
Mechanisms of Retrovirus-induced Cancers01:51

Mechanisms of Retrovirus-induced Cancers

Retroviruses are RNA viruses that have been shown to cause cancers in diverse species, including chickens, mice, cats, and monkeys. The RNA genomes of these viruses are first reverse-transcribed into single and then double-stranded DNA (dsDNA) copies. This dsDNA called proviral DNA then integrates into the host genome. Subsequently, the host cell transcribes the proviral DNA in concert with the chromosomal DNA. This leads to the production of viral RNA and proteins that assemble at the host...
Size and Structure of Viral Genomes01:26

Size and Structure of Viral Genomes

Viral genomes exhibit remarkable diversity in size, structure, and composition, influencing their replication strategies and interactions with host cells. These genomes consist of either DNA or RNA and may be linear or circular. Additionally, they can be single-stranded or double-stranded, with each configuration affecting how the virus propagates within a host. RNA viruses, for instance, generally have smaller genomes than DNA viruses, a factor that contributes to their high mutation rates and...