Review of statistical methods for QTL mapping in experimental crosses

In the 1850s and 1860s, Gregor Mendel investigated inheritance by performing monohybrid crosses in pea plants. He crossed two plants that were true-breeding for different traits. Based on his observations, Mendel proposed that organisms inherit two copies of each trait, one from each parent, and that dominant traits can hide recessive traits. These results formed the basis of two fundamental principles in genetics: the Principle of Uniformity and the Law of Segregation.Monohybrid Crosses Reveal...

In the 1850s and 1860s, Gregor Mendel investigated inheritance by performing monohybrid crosses in pea plants. He crossed two plants that were true-breeding for different traits. Based on his observations, Mendel proposed that organisms inherit two copies of each trait, one from each parent, and that dominant traits can hide recessive traits. These results formed the basis of two fundamental principles in genetics: the Principle of Uniformity and the Law of Segregation.Monohybrid Crosses Reveal...

The chi-square test is a statistical hypothesis test. It is used to check whether there is a significant difference between an expected value and an observed value. In the context of genetics, it enables us to either accept or reject a hypothesis, based on how much the observed values deviate from the expected values.
The chi-square test was developed by Pearson in 1990.
The first step of performing a Chi-square analysis is to establish a null hypothesis, which assumes that there is no real...

To determine whether traits are inherited together or separately, Gregor Mendel crossed pea plants that differed in two traits. These parental plants were homozygous for both traits but displayed different phenotypes. The first generation of offspring were all dihybrids, heterozygotes exhibiting the two dominant phenotypes. When self-fertilized, the dihybrids consistently produced progeny with a 9:3:3:1 ratio of four possible phenotype combinations. This ratio suggested that inheriting one...

Trihybrid Crosses
Some of Mendel’s crosses examined three pairs of contrasting characteristics. Such a cross is called a trihybrid cross. A trihybrid cross is a combination of three individual monohybrid crosses. For example, plant height (tall vs. short), seed shape (round vs. wrinkled), and seed color (yellow vs. green).
The F1 generation plants of a trihybrid cross are heterozygous for all three traits and produce eight gametes. Upon self-fertilization, these gametes have an equal chance to...

Alleles are different forms of the same gene. Humans and other diploid organisms inherit two alleles of every gene, one from each parent.