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Published on: November 16, 2011
Analysis of TGF-beta type I receptor for mutations and polymorphisms in head and neck cancers
T J Knobloch1, M A Lynch, H Song
1Division of Environmental Health Sciences, School of Public Health, College of Medicine and Public Health, The Ohio State University, Columbus, OH 43210, USA.
Abstract:
Transforming growth factor-beta receptor (TbetaR)-dependent signals are critical for cell growth and differentiation and are often disrupted during tumorigenesis. The entire coding region of TbetaR-I and flanking intron sequences from 30 head and neck carcinomas were examined for alterations using "Cold" SSCP and direct sequencing. No somatic point mutations were found in the TbetaR-I gene. In contrast, 14 polymorphic sequence changes were detected in TbetaR-I in 13 (43%) of the samples, including eight (27%) nucleotide alterations identified as polymorphisms in an exon-1 (GCG)(9) microsatellite repeat, a previously reported tumor susceptibility allele. A nine base pair deletion was found in 23% of the samples including five heterozygous and two homozygous deletions as well as single homozygous 12bp deletion. Additionally, six heterozygous polymorphisms in intronic sequences were determined, including one heterozygous C/A genotype at the +82 nucleotide position of the intron-5 intervening sequence (IVS), and five heterozygous G/A genotypes within intron-7 at the +24 nucleotide position. Exon-1 polymorphisms in the (GCG)(9) microsatellite region of the TbetaR-I gene and their association with head/neck cancers, suggest that development of these cancers may be a direct consequence of loss of responsiveness to TGF-beta mediated growth inhibition.
Insights
Polymorphisms in the transforming growth factor-beta receptor-I (TbetaR-I) gene, particularly in the exon-1 microsatellite region, are associated with head and neck cancers. These genetic variations may lead to reduced sensitivity to TGF-beta growth inhibition, contributing to tumor development.
Area of Science:
- Oncology
- Molecular Biology
- Genetics
Background:
- Transforming growth factor-beta receptor (TbetaR)-dependent signals regulate cell growth and differentiation.
- Disruptions in TbetaR signaling are frequently observed in tumorigenesis.
- Head and neck carcinomas often exhibit altered cellular signaling pathways.
Purpose of the Study:
- To investigate genetic alterations in the TbetaR-I gene in head and neck carcinomas.
- To identify potential tumor susceptibility alleles within the TbetaR-I gene.
- To explore the association between TbetaR-I polymorphisms and head and neck cancer development.
Main Methods:
- Analysis of the entire coding region and flanking introns of TbetaR-I in 30 head and neck carcinomas.
- Utilized "Cold" Single-Strand Conformation Polymorphism (SSCP) and direct sequencing for mutation detection.
- Identified and characterized sequence variations, including microsatellite repeats and deletions.
Main Results:
- No somatic point mutations were detected in the TbetaR-I gene.
- Fourteen polymorphic sequence changes were found in 13 (43%) of the samples.
- Eight (27%) nucleotide alterations were identified as polymorphisms in the exon-1 (GCG)(9) microsatellite repeat, a known tumor susceptibility allele.
- A nine base pair deletion was present in 23% of samples.
- Six heterozygous polymorphisms were identified in intronic sequences.
Conclusions:
- Exon-1 polymorphisms in the TbetaR-I (GCG)(9) microsatellite region are associated with head and neck cancers.
- These polymorphisms may contribute to cancer development by impairing responsiveness to TGF-beta mediated growth inhibition.
- The findings suggest a role for TbetaR-I genetic variations in head and neck tumorigenesis.
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