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Published on: April 4, 2018
Nomenclature for the description of human sequence variations
J T den Dunnen1, S E Antonarakis
1MGC Department of Human and Clinical Genetics, Leiden University Medical Center, Leiden, The Netherlands. ddunnen@lumc.nl
A new nomenclature system for DNA and protein sequence changes is widely accepted but needs updates. This paper proposes extensions to describe more complex mutations and polymorphisms.
Area of Science:
- Genetics
- Molecular Biology
- Bioinformatics
Background:
- A standardized nomenclature system for describing sequence alterations in DNA and proteins has been proposed.
- These recommendations have gained broad acceptance within the scientific community.
- Existing guidelines do not encompass all mutation types or complex genetic alterations.
Purpose of the Study:
- To review and consolidate current nomenclature recommendations for sequence variations.
- To propose extensions and new rules for describing complex mutations and polymorphisms.
- To ensure comprehensive and accurate reporting of genetic changes.
Main Methods:
- Review of existing nomenclature guidelines for DNA and protein sequence changes.
- Identification of limitations in current rules regarding complex mutations.
- Development of suggested extensions to the nomenclature system.
Main Results:
- The paper details the currently accepted nomenclature for simple mutations and polymorphisms.
- It outlines specific proposals for describing more complex genetic alterations.
- The document serves as a comprehensive guide for reporting sequence variations.
Conclusions:
- While current nomenclature is largely adopted, further development is necessary.
- The proposed extensions aim to standardize the description of complex genetic changes.
- Accurate and consistent nomenclature is crucial for genetic research and clinical applications.
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