Regulation of DNA replication fork progression through damaged DNA by the Mec1/Rad53 checkpoint

J A Tercero1, J F Diffley

  • 1Imperial Cancer Research Fund, Clare Hall Laboratories, South Mimms EN6 3LD, UK.

Nature
|August 3, 2001
PubMed

Insights

Checkpoint kinases Mec1 and Rad53 protect Saccharomyces cerevisiae from DNA damage. Preventing replication fork collapse is key to cell viability during DNA alkylation.

Area of Science:

  • Molecular Biology
  • Cell Biology
  • Genetics

Background:

  • Checkpoint kinases Mec1 and Rad53 are crucial for maintaining cell viability in Saccharomyces cerevisiae when facing DNA damage or replication stress.
  • These proteins are believed to function by halting cell cycle progression, thereby allowing time for DNA repair.
  • Mec1 and Rad53 also slow S phase progression in response to DNA alkylation, but the precise mechanism and its significance remain unclear.

Purpose of the Study:

  • To investigate the role of Mec1 and Rad53 in regulating DNA replication fork progression during exposure to the DNA-alkylating agent methyl methanesulphonate (MMS).
  • To elucidate the mechanism by which Mec1 and Rad53 protect cells from DNA alkylation-induced cytotoxicity.

Main Methods:

  • Utilized Saccharomyces cerevisiae as a model organism.
  • Applied methyl methanesulphonate (MMS) to induce DNA damage and replication stress.
  • Compared DNA replication fork progression and cell viability in wild-type and checkpoint-deficient (mec1, rad53) yeast strains.

Main Results:

  • MMS significantly reduced DNA replication fork progression, but this effect did not require Mec1 or Rad53.
  • Checkpoint mutants exhibited accelerated S phase due to aberrant initiation events.
  • Replication forks in checkpoint mutants collapsed irreversibly at high rates in the presence of MMS.
  • Cytotoxicity of MMS in checkpoint mutants was observed specifically when cells entered S phase with DNA damage.

Conclusions:

  • The primary role of Mec1 and Rad53 in response to DNA alkylation is not to slow replication forks but to prevent inappropriate initiation events.
  • Preventing damage-induced DNA replication fork catastrophe is a critical mechanism by which these checkpoints maintain cell viability.
  • Checkpoint integrity is essential for preventing irreversible replication fork collapse and subsequent cell death when cells encounter DNA damage during S phase.

Related Concept Videos

Mismatch Repair01:36

Mismatch Repair

Overview
DNA Damage can Stall the Cell Cycle02:36

DNA Damage can Stall the Cell Cycle

In response to DNA damage, cells can pause the cell cycle to assess and repair the breaks. However, the cell must check the DNA at certain critical stages during the cell cycle. If the cell cycle pauses before DNA replication, the cells will contain twice the amount of DNA. On the other hand, if cells arrest after DNA replication but before mitosis, they will contain four times the normal amount of DNA. With a host of specialized proteins at their disposal,cells must use the right protein at...
Homologous Recombination02:31

Homologous Recombination

The basic reaction of homologous recombination (HR) involves two chromatids that contain DNA sequences sharing a significant stretch of identity. One of these sequences uses a strand from another as a template to synthesize DNA in an enzyme-catalyzed reaction. The final product is a novel amalgamation of the two substrates. To ensure an accurate recombination of sequences, HR is restricted to the S and G2 phases of the cell cycle. At these stages, the DNA has been replicated already and the...
Restarting Stalled Replication Forks02:37

Restarting Stalled Replication Forks

DNA replication is initiated at sites containing predefined DNA sequences known as origins of replication. DNA is unwound at these sites by the minichromosome maintenance (MCM) helicase and other factors such as Cdc45 and the associated GINS complex.The unwound single strands are protected by replication protein A (RPA) until DNA polymerase starts synthesizing DNA at the 5’ end of the strand in the same direction as the replication fork. To prevent the replication fork from falling apart, a...
Mismatch Repair01:20

Mismatch Repair

Organisms are capable of detecting and fixing nucleotide mismatches that occur during DNA replication. This sophisticated process requires identifying the new strand and replacing the erroneous bases with correct nucleotides. Mismatch repair is coordinated by many proteins in both prokaryotes and eukaryotes.
The Mutator Protein Family Plays a Key Role in DNA Mismatch Repair
The human genome has more than 3 billion base pairs of DNA per cell. Prior to cell division, that vast amount of genetic...
DNA Damage Can Stall the Cell Cycle02:36

DNA Damage Can Stall the Cell Cycle

In response to DNA damage, cells can pause the cell cycle to assess and repair the breaks. However, the cell must check the DNA at certain critical stages during the cell cycle. If the cell cycle pauses before DNA replication, the cells will contain twice the amount of DNA. On the other hand, if cells arrest after DNA replication but before mitosis, they will contain four times the normal amount of DNA. With a host of specialized proteins at their disposal,cells must use the right protein at...