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Sample Preparation for Mass Spectrometry-based Identification of RNA-binding Regions
Published on: September 28, 2017
Overlapping functions of the pRb family in the regulation of rRNA synthesis
S Ciarmatori1, P H Scott, J E Sutcliffe
1Division of Molecular Biology of the Cell II, German Cancer Research Centre, Im Neuenheimer Feld 280, D-69120 Heidelberg, Germany.
Abstract:
The "pocket" proteins pRb, p107, and p130 are a family of negative growth regulators. Previous studies have demonstrated that overexpression of pRb can repress transcription by RNA polymerase (Pol) I. To assess whether pRb performs this role under physiological conditions, we have examined pre-rRNA levels in cells from mice lacking either pRb alone or combinations of the three pocket proteins. Pol I transcription was unaffected in pRb-knockout fibroblasts, but specific disruption of the entire pRb family deregulated rRNA synthesis. Further analysis showed that p130 shares with pRb the ability to repress Pol I transcription, whereas p107 is ineffective in this system. Production of rRNA is abnormally elevated in Rb(-/-) p130(-/-) fibroblasts. Furthermore, overexpression of p130 can inhibit an rRNA promoter both in vitro and in vivo. This reflects an ability of p130 to bind and inactivate the upstream binding factor, UBF. The data imply that rRNA synthesis in living cells is subject to redundant control by endogenous pRb and p130.
Insights
The pocket proteins pRb and p130 negatively regulate cell growth by controlling RNA polymerase I transcription. Disrupting the pRb family deregulates rRNA synthesis, indicating redundant control.
Area of Science:
- Molecular Biology
- Cell Biology
- Genetics
Background:
- The pocket proteins pRb, p107, and p130 are known negative regulators of cell growth.
- Previous research indicated that pRb overexpression can inhibit RNA polymerase I (Pol I) transcription.
Purpose of the Study:
- To investigate whether pRb represses Pol I transcription under physiological conditions.
- To determine the roles of pRb, p107, and p130 in regulating ribosomal RNA (rRNA) synthesis.
Main Methods:
- Examined pre-rRNA levels in mouse cells lacking pRb alone or in combination with p107 and p130.
- Assessed the impact of pRb family protein disruption on Pol I transcription.
- Investigated the in vitro and in vivo effects of p130 overexpression on rRNA synthesis and UBF binding.
Main Results:
- Pol I transcription was unaffected in pRb-knockout fibroblasts.
- Disruption of the entire pRb family deregulated rRNA synthesis.
- p130, but not p107, shares the ability with pRb to repress Pol I transcription.
- rRNA production was abnormally elevated in Rb(-/-) p130(-/-) fibroblasts.
- p130 overexpression inhibited an rRNA promoter and bound/inactivated the upstream binding factor (UBF).
Conclusions:
- Endogenous pRb and p130 provide redundant control over rRNA synthesis.
- p130 plays a significant role in repressing Pol I transcription, partly through UBF inactivation.
- The pRb family, particularly p130, is crucial for regulating rRNA synthesis in living cells.
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