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Updated: Aug 12, 2026

A New Approach for the Comparative Analysis of Multiprotein Complexes Based on 15N Metabolic Labeling and Quantitative Mass Spectrometry
Published on: March 13, 2014
Comprehensive survey of proteins targeted by chloroplast thioredoxin
K Motohashi1, A Kondoh, M T Stumpp
1Chemical Resources Laboratory, Tokyo Institute of Technology, Nagatsuta 4259, Midori-ku, Yokohama 226-8503, Japan.
Abstract:
Possible target proteins of chloroplast thioredoxin (Trx) have been investigated in the stroma lysate of spinach chloroplasts. For that purpose, we immobilized a mutant of m-type Trx in which an internal cysteine at the active site was substituted with serine, on cyanogen bromide-activated resin. By using this resin, the target proteins in chloroplast were efficiently acquired when they formed the mixed-disulfide intermediates with the immobilized Trxs. We could acquire Rubisco activase (45 kDa) and 2-Cys-type peroxiredoxin (Prx), which were recently identified as targets of chloroplast Trxs. Glyceraldehyde-3-phosphate dehydrogenase and sedoheputulose 1,7-bisphosphatase, well-known thiol enzymes in the Calvin cycle, also were recognized among the collected proteins, suggesting the method is applicable for our purpose. Furthermore, four proteins were identified from a homology search of the NH(2)-terminal sequence of the acquired proteins: glutamine synthetase, a protein homologous to chloroplast cyclophilin, a homolog of Prx-Q, and the Rubisco small subunit. The Trx susceptibilities of the recombinant cyclophilin and Prx-Q of Arabidopsis thaliana were then examined. The method developed in the present study is thus applicable to investigate the various redox networks via Trxs and the related enzymes in the cell.
Insights
Researchers developed a novel method to identify chloroplast thioredoxin (Trx) targets. This technique immobilizes Trx to capture proteins involved in cellular redox networks, aiding in understanding plant cell regulation.
Area of Science:
- Plant Biochemistry
- Molecular Biology
- Redox Signaling
Background:
- Chloroplast thioredoxins (Trxs) are crucial for regulating plant cellular processes through redox control.
- Identifying Trx target proteins is essential for understanding these complex redox networks.
Purpose of the Study:
- To develop and validate a method for identifying novel chloroplast Trx target proteins.
- To investigate the redox regulation of proteins within spinach chloroplast stroma.
Main Methods:
- Immobilization of a mutant m-type thioredoxin onto cyanogen bromide-activated resin.
- Affinity capture of proteins forming mixed-disulfide intermediates with immobilized Trx.
- Identification of captured proteins using SDS-PAGE, N-terminal sequencing, and homology searches.
Main Results:
- Successfully identified known Trx targets like Rubisco activase and 2-Cys-type peroxiredoxin (Prx).
- Also identified Calvin cycle enzymes (GAPDH, SBpase) and novel potential targets including glutamine synthetase, cyclophilin, Prx-Q, and Rubisco small subunit.
- Confirmed Trx susceptibility for Arabidopsis thaliana cyclophilin and Prx-Q.
Conclusions:
- The developed immobilization method is effective for identifying chloroplast Trx targets.
- This approach facilitates the investigation of diverse redox networks and related enzymes in plant cells.
- Provides a valuable tool for advancing the study of thioredoxin-mediated regulation in chloroplasts.
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