Related Experiment Video
Updated: Aug 16, 2026

Peptide Scanning-assisted Identification of a Monoclonal Antibody-recognized Linear B-cell Epitope
Published on: March 24, 2017
Isolated hypervariable regions derived from streptococcal M proteins specifically bind human C4b-binding protein:
E Morfeldt1, K Berggård, J Persson
1Department of Medical Microbiology, Dermatology, and Infection, Lund University, Sölvegatan 23, SE-22362 Lund, Sweden.
Abstract:
Antigenic variation in microbial surface proteins represents an apparent paradox, because the variable region must retain an important function, while exhibiting extensive immunological variability. We studied this problem for a group of streptococcal M proteins in which the approximately 50-residue hypervariable regions (HVRs) show essentially no residue identity but nevertheless bind the same ligand, the human complement regulator C4b-binding protein (C4BP). Synthetic peptides derived from different HVRs were found to retain the ability to bind C4BP, implying that the HVR corresponds to a distinct ligand-binding domain that can be studied in isolated form. This finding allowed direct characterization of the ligand-binding properties of isolated HVRs and permitted comparisons between different HVRs in the absence of conserved parts of the M proteins. Affinity chromatography of human serum on immobilized peptides showed that they bound C4BP with high specificity and inhibition experiments indicated that different peptides bound to the same site in C4BP. Different C4BP-binding peptides did not exhibit any immunological cross-reactivity, but structural analysis suggested that they have similar folds. These data show that the HVR of streptococcal M protein can exhibit extreme variability in sequence and immunological properties while retaining a highly specific ligand-binding function.
Insights
Streptococcal M protein hypervariable regions (HVRs) vary greatly in sequence but bind the same complement protein, C4BP. This study shows HVRs are distinct domains retaining specific C4BP binding despite sequence and immune differences.
Area of Science:
- Microbiology
- Immunology
- Structural Biology
Background:
- Microbial surface proteins exhibit antigenic variation, posing a paradox where functional regions must also be immunologically diverse.
- Streptococcal M proteins feature hypervariable regions (HVRs) with minimal sequence identity yet bind the same ligand, human C4b-binding protein (C4BP).
Purpose of the Study:
- To investigate how hypervariable regions (HVRs) of streptococcal M proteins maintain specific ligand binding despite extensive sequence and immunological variation.
- To characterize the isolated HVRs as distinct functional domains for ligand interaction.
Main Methods:
- Synthesis of peptides representing different HVRs of streptococcal M proteins.
- Affinity chromatography using immobilized HVR peptides to capture C4BP from human serum.
- Inhibition experiments and structural analysis to compare binding interactions and peptide structures.
Main Results:
- Synthetic HVR peptides retained the ability to bind C4BP, confirming HVRs as independent ligand-binding domains.
- HVR peptides bound C4BP with high specificity, interacting with the same site on the protein.
- Despite sequence divergence and lack of immunological cross-reactivity, HVR peptides exhibited similar structural folds.
Conclusions:
- Streptococcal M protein HVRs can undergo extreme sequence and immunological variation while preserving specific C4BP binding.
- The HVR functions as a distinct domain capable of maintaining specific ligand interactions independently of conserved protein regions.
More Related Videos
Related Concept Videos
Antibody Structure
Antibodies, also known as immunoglobulins (Ig), are essential players of the adaptive immune system. These antigen-binding proteins are produced by B cells and make up 20 percent of the total blood plasma by weight. In mammals, antibodies fall into five different classes, which each elicits a different biological response upon antigen binding.
The Y-Shaped Structure of Antibodies Consists of Four Polypeptide Chains
Antibodies consist of four polypeptide chains: two identical heavy...
Cross-reactivity
Conserved Binding Sites
Binding sites are often located in large pockets, and if their location on a protein’s surface is unknown, it can be predicted using various approaches. The energetic method computationally analyses the...
Immunoglobulin-like Cell Adhesion Molecules
Ig-CAMs exhibit either homophilic binding (to other Ig-CAMs) or heterophilic binding (to other ligands such as integrins). While most Ig-CAMs...
Antigens Involved in Adaptive Immunity
Complete Antigens
Complete antigens possess both immunogenicity and reactivity.
Diversity of Antigen Receptors
Before encountering any antigen, lymphocytes express these receptors. On B cells, the antigen receptor is a membrane-bound antibody molecule called BCR; on T cells, it is a T cell receptor or TCR. B and T cell receptors are composed of two...

