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Published on: June 27, 2017
Identification of genetic alterations in the TGFbeta type II receptor gene promoter
1Department of Oncology, H. Lee Moffitt Cancer Center & Research Institute, University of South Florida, 12902 Magnolia Drive, Tampa, FL 33612, USA.
Abstract:
Modifications in the control sequences of tumor suppressor genes have been found to play a role in the activation or inactivation of these genes and may play an important role in tumorigenesis. For example, hypermethylation of CpG islands and promoter polymorphisms have been found to be involved in transcriptional repression. A decrease in the levels of expression of one such tumor suppressor gene, the TGFbeta type II receptor (TbetaR-II), has been associated with increased tumorigenicity in a number of human tumors. Genetic alterations have been described in several tumor types in the coding region of this gene. However, no comprehensive search for genetic alterations in the TbetaR-II promoter has been reported. Genetic alterations in the promoter of the TbetaR-II gene could inhibit binding of putative regulatory factors. For example, we have reported a A-364-G alteration in the TbetaR-II promoter, which results in decreased transcriptional activity. In this study, we analyzed the 1.0kb region upstream of the TbetaR-II transcriptional start site and found genetic alterations in 46% of the head and neck squamous cell carcinoma (SqCC) samples examined. The most frequent alteration was a G-875-A alteration, present in 41.6% of the samples. Analysis of normal healthy individuals showed a similar frequency of this alteration, suggesting that alterations within the TbetaR-II promoter are unlikely to account for the decreased expression of TbetaR-II in head and neck SqCC.
Insights
Genetic alterations in the tumor suppressor gene TGFbeta type II receptor (TbetaR-II) promoter were investigated in head and neck cancer. The study found common promoter alterations, but they were also present in healthy individuals, suggesting they don't cause decreased TbetaR-II expression in tumors.
Area of Science:
- Oncology
- Molecular Biology
- Genetics
Background:
- Tumor suppressor gene modifications, like promoter hypermethylation and polymorphisms, can impact gene expression and contribute to tumorigenesis.
- Decreased expression of the TGFbeta type II receptor (TbetaR-II) is linked to increased tumorigenicity in various human cancers.
- While coding region alterations in TbetaR-II are known, a comprehensive analysis of its promoter region in head and neck squamous cell carcinoma (SqCC) was lacking.
Purpose of the Study:
- To investigate genetic alterations within the 1.0kb promoter region of the TbetaR-II gene in head and neck squamous cell carcinoma (SqCC).
- To determine if identified promoter alterations correlate with decreased TbetaR-II expression and contribute to tumorigenesis in head and neck SqCC.
Main Methods:
- Analysis of the 1.0kb upstream region of the TbetaR-II transcriptional start site in SqCC samples.
- Identification and frequency analysis of genetic alterations, particularly the G-875-A alteration.
- Comparison of alteration frequencies in SqCC samples versus normal healthy individuals.
Main Results:
- Genetic alterations were found in 46% of the examined head and neck SqCC samples.
- The most prevalent alteration was G-875-A, observed in 41.6% of SqCC samples.
- The G-875-A alteration showed a similar frequency in normal healthy individuals, indicating it is not specific to SqCC.
Conclusions:
- Alterations within the TbetaR-II promoter region are common in the general population.
- The high frequency of the G-875-A alteration in both SqCC and healthy individuals suggests it is unlikely to be the primary cause of decreased TbetaR-II expression in head and neck SqCC.
- Further research is needed to identify the specific mechanisms responsible for reduced TbetaR-II expression in head and neck tumors.
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