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A Protocol for Analyzing Hepatitis C Virus Replication
Published on: June 26, 2014
Hepatitis C virus NS4A and NS4B proteins suppress translation in vivo
Jun Kato1, Naoya Kato, Hideo Yoshida
1Department of Gastroenterology, Faculty of Medicine, University of Tokyo, Tokyo, Japan.
Abstract:
Many viruses can inhibit protein synthesis in their host cells by targeting translation ("translational shutoff"). There are few reports on the effects of hepatitis C virus (HCV) infection on protein synthesis, because of the lack of a reproducible tissue culture system for HCV. In this study, the influence of seven HCV proteins (core, NS2, NS3, NS4A, NS4B, NS5A, NS5B) on protein synthesis was examined using a reporter assay. In addition, it was determined whether the HCV proteins inhibit protein synthesis via transcription or translation using an RNase protection assay and the effect of HCV proteins on translation from the HCV internal ribosome entry site (IRES) was also examined using a bicistronic reporter. Of the seven HCV proteins, NS4A and NS4B proteins inhibited cellular protein synthesis by targeting the process of translation. They also inhibited translation from the HCV IRES. Moreover, NS4A protein, induced under the control of doxycycline, inhibited the proliferation of HeLa cells. In conclusion, HCV NS4A and NS4B proteins have an effect of translational inhibition. This novel function may be involved in HCV infection and help its survival in host cells.
Insights
Hepatitis C virus (HCV) proteins NS4A and NS4B were found to inhibit host cell protein synthesis by targeting translation. This translational inhibition may aid HCV survival within host cells.
Area of Science:
- Virology
- Molecular Biology
- Cellular Biology
Background:
- Viruses often inhibit host protein synthesis to promote their replication.
- Hepatitis C virus (HCV) infection's impact on protein synthesis is poorly understood due to limited cell culture models.
Purpose of the Study:
- To investigate the effects of seven HCV proteins on host protein synthesis.
- To determine if HCV proteins target transcription or translation.
- To assess HCV protein influence on translation initiation via the HCV internal ribosome entry site (IRES).
Main Methods:
- Reporter assays were used to examine the influence of individual HCV proteins (core, NS2, NS3, NS4A, NS4B, NS5A, NS5B) on protein synthesis.
- RNase protection assays differentiated between transcriptional and translational inhibition.
- Bicistronic reporters evaluated the effect on HCV IRES-mediated translation.
Main Results:
- HCV NS4A and NS4B proteins significantly inhibited cellular protein synthesis.
- These proteins were confirmed to target the translation process, not transcription.
- NS4A and NS4B also inhibited translation initiated from the HCV IRES.
- NS4A expression inhibited HeLa cell proliferation.
Conclusions:
- HCV NS4A and NS4B proteins possess translational inhibitory functions.
- This newly identified function of NS4A and NS4B may play a role in HCV pathogenesis and viral persistence.
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