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Updated: Oct 2, 2026

Hybrid Ensemble and Single-molecule Assay to Image the Motion of Fully Reconstituted CMG
Published on: July 26, 2024
Physical and functional interaction between the mini-chromosome maintenance-like DNA helicase and the single-stranded
Floriana Carpentieri1, Mariarita De Felice, Mariarosaria De Falco
1Istituto di Biochimica delle Proteine, Consiglio Nazionale delle Ricerche, Via P. Castellino 111, Napoli 80131, Italy.
Abstract:
Mini-chromosome Maintenance (MCM) proteins play an essential role in both initiation and elongation phases of DNA replication in Eukarya. Genes encoding MCM homologs are present also in the genomic sequence of Archaea and the MCM-like protein from the euryarchaeon Methanobacterium thermoautotrophicum (Mth MCM) was shown to possess a robust ATP-dependent 3'-5' DNA helicase activity in vitro. Herein, we report the first biochemical characterization of a MCM homolog from a crenarchaeon, the thermoacidophile Sulfolobus solfataricus (Sso MCM). Gel filtration and glycerol gradient centrifugation experiments indicate that the Sso MCM forms single hexamers (470 kDa) in solution, whereas the Mth MCM assembles into double hexamers. The Sso MCM has NTPase and DNA helicase activity, which preferentially acts on DNA duplexes containing a 5'-tail and is stimulated by the single-stranded DNA binding protein from S. solfataricus (Sso SSB). In support of this functional interaction, we demonstrated by immunological methods that the Sso MCM and SSB form protein.protein complexes. These findings provide the first in vitro biochemical evidence of a physical/functional interaction between a MCM complex and another replication factor and suggest that the two proteins may function together in vivo in important DNA metabolic pathways.
Insights
This study characterizes the Sulfolobus solfataricus Mini-chromosome Maintenance (Sso MCM) protein, revealing its DNA helicase activity and interaction with Sso SSB protein. These findings suggest a collaborative role in DNA replication pathways.
Area of Science:
- Molecular Biology
- Biochemistry
- Genetics
Background:
- Mini-chromosome Maintenance (MCM) proteins are crucial for DNA replication initiation and elongation in eukaryotes.
- MCM homologs are found in Archaea, with Mth MCM exhibiting ATP-dependent DNA helicase activity.
Purpose of the Study:
- To biochemically characterize the MCM homolog from the crenarchaeon Sulfolobus solfataricus (Sso MCM).
- To investigate the oligomeric state, enzymatic activities, and interactions of Sso MCM.
Main Methods:
- Gel filtration and glycerol gradient centrifugation to determine oligomeric state.
- In vitro assays to assess NTPase and DNA helicase activity.
- Immunological methods to detect protein-protein interactions.
Main Results:
- Sso MCM forms single hexamers, unlike the double hexamers of Mth MCM.
- Sso MCM exhibits NTPase and DNA helicase activity, preferring DNA with a 5'-tail.
- Sso MCM activity is stimulated by Sso single-stranded DNA binding protein (SSB), with which it forms complexes.
Conclusions:
- This is the first in vitro biochemical evidence of a physical and functional interaction between a MCM complex and another replication factor.
- Sso MCM and Sso SSB likely function together in vivo within DNA metabolic pathways.
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