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Trev: a DNA trace editor and viewer.

James K Bonfield1, Kathryn F Beal, Matthew J Betts

  • 1MRC Laboratory of Molecular Biology, Hills Road, Cambridge CB2 2QH, UK. jkb@mrc-lmb.cam.ac.jp

Bioinformatics (Oxford, England)
|February 12, 2002
PubMed
Summary
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Trev is a free DNA trace editor and viewer for UNIX and Windows. It supports common file formats, including new ZTR files, for efficient DNA sequence analysis.

Area of Science:

  • Bioinformatics
  • Computational Biology
  • Genomics

Background:

  • DNA sequence analysis is crucial for genetic research.
  • Efficient tools are needed for viewing and editing DNA trace data.
  • Compatibility with various file formats is essential for data integration.

Purpose of the Study:

  • To introduce Trev, a novel DNA trace editor and viewer.
  • To provide a free and accessible software solution for researchers.
  • To ensure compatibility with a wide range of DNA file formats.

Main Methods:

  • Development of a user-friendly interface for DNA trace visualization.
  • Implementation of editing functionalities for DNA sequence data.
  • Support for multiple common DNA file formats, including ZTR.

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Main Results:

  • Trev offers a robust platform for viewing and editing DNA traces.
  • The software is freely available for UNIX and Microsoft Windows operating systems.
  • Trev successfully reads and processes standard DNA file formats and the compact ZTR format.

Conclusions:

  • Trev provides a valuable, free resource for DNA sequence data management.
  • Its cross-platform availability and format compatibility enhance its utility in research settings.
  • The software facilitates efficient DNA trace analysis for a broad scientific audience.