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Cycloheximide Chase Analysis of Protein Degradation in Saccharomyces cerevisiae
Published on: April 18, 2016
Ornithine decarboxylase-antizyme is rapidly degraded through a mechanism that requires functional ubiquitin-dependent
Shilpa Gandre1, Zippi Bercovich, Chaim Kahana
1Department of Molecular Genetics, Weizmann Institute of Science, Israel.
Abstract:
Antizyme is a polyamine-induced cellular protein that binds to ornithine decarboxylase (ODC), and targets it to rapid ubiquitin-independent degradation by the 26S proteasome. However, the metabolic fate of antizyme is not clear. We have tested the stability of antizyme in mammalian cells. In contrast with previous studies demonstrating stability in vitro in a reticulocyte lysate-based degradation system, in cells antizyme is rapidly degraded and this degradation is inhibited by specific proteasome inhibitors. While the degradation of ODC is stimulated by the presence of cotransfected antizyme, degradation of antizyme seems to be independent of ODC, suggesting that antizyme degradation does not occur while presenting ODC to the 26S proteasome. Interestingly, both species of antizyme, which represent initiation at two in-frame initiation codons, are rapidly degraded. The degradation of both antizyme proteins is inhibited in ts20 cells containing a thermosensitive ubiquitin-activating enzyme, E1. Therefore we conclude that in contrast with ubiquitin-independent degradation of ODC, degradation of antizyme requires a functional ubiquitin system.
Insights
Antizyme, a protein regulating polyamine metabolism, is rapidly degraded in mammalian cells. This degradation requires a functional ubiquitin system, unlike ornithine decarboxylase (ODC) degradation.
Area of Science:
- Cellular and Molecular Biology
- Biochemistry
- Protein Degradation Pathways
Background:
- Antizyme is a cellular protein induced by polyamines.
- It binds to ornithine decarboxylase (ODC) and targets it for degradation.
- The degradation of ODC by antizyme is known to be ubiquitin-independent via the 26S proteasome.
Purpose of the Study:
- To investigate the metabolic fate and stability of antizyme in mammalian cells.
- To determine the mechanism and requirements for antizyme degradation.
- To compare the degradation pathways of antizyme and ODC.
Main Methods:
- Transfection of mammalian cells with antizyme.
- Treatment with proteasome inhibitors.
- Analysis of antizyme degradation in cells with thermosensitive ubiquitin-activating enzyme (E1).
Main Results:
- Antizyme is rapidly degraded in mammalian cells, contrasting with in vitro stability.
- Antizyme degradation is inhibited by proteasome inhibitors.
- Antizyme degradation is independent of ODC presence.
- Degradation of both antizyme forms is inhibited in cells with a defective ubiquitin-activating enzyme (E1).
Conclusions:
- Antizyme degradation in mammalian cells is a distinct process from ODC degradation.
- Unlike ODC's ubiquitin-independent degradation, antizyme degradation requires a functional ubiquitin system.
- This suggests a novel role for the ubiquitin system in regulating antizyme stability.
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